FMO06081.5prime Sequence
493 bp (492 high quality bases) assembled on 2008-09-09
> FMO06081.5prime
GCCATGCTCAACGGGAGGAGCAGTAGCGTCAGCAGGGGTAACCACCAGCA
ATGCCACGCCCAGTGCGCCTAGTACGCCCACAACAGCAGCAGCAGCAGCA
GCAGCAGCGGCGGCAGCAGCATCTGCTGCAGATCCAACCGCAACGAATCC
GCAAAATCCGCAGCAACGCAGCAAGAGCAACATCCATGAGCTAAGAAATC
AGGACTACGTCAGTCGTTTAATGGCAGCCACACCACCGTATTTGTATTCC
GCACCCGTGGGACCAAATAATTTCTTTTTCAGCGATATGCTGCGTTCCTT
GGTGCAAGCGCGAAATAATGAGACGGCGCGTGTCTTGCAGCTGCAGCAGC
AACAGCAGCAGCAGCAGCAGCAGGCACAGCAACAACAGCAGCAGCAACAT
CAGGCCGCCTTGGTGAGGCGGCCAAGAAAACGCTCCTGGTCGCATCGTCC
ATACTACGAGCAATTGCGGGAGCGACGCGATGCAGAGGAGAAG
FMO06081.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15478-RB | 1855 | CG15478-RB | 202..694 | 1..493 | 2465 | 100 | Plus |
CG15478-RA | 1851 | CG15478-RA | 198..690 | 1..493 | 2465 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7713944..7714436 | 493..1 | 2465 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 19:46:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gypsy9 | 5349 | gypsy9 GYPSY9 5349bp | 4735..4847 | 112..227 | 106 | 58.8 | Plus |
FMO06081.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:13 Download gff for
FMO06081.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15478-RA | 198..690 | 1..493 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-09 11:02:55 Download gff for
FMO06081.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15478-RA | 194..686 | 1..493 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:02 Download gff for
FMO06081.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15478-RA | 198..690 | 1..493 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:02 Download gff for
FMO06081.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7713944..7714436 | 1..493 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:13 Download gff for
FMO06081.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 7607977..7608469 | 1..493 | 100 | | Minus |