FMO06107.5prime Sequence
808 bp (31 high quality bases) assembled on 2008-09-15
> FMO06107.5prime
CAATCCACATGGGCAACAAGAACTCGTGCTGCGCGTACTCCAGTCCGCAA
TCGGACCGCAAGTCTAATGACATGCCGCCCGTCTTCGAGGATCGGATTAT
CCTTCTGGGTCATCCGCCGCACGCGTCGCATCACCAGTTGGACGGCCACC
ATGGATCCGCGTCTGCGGTGCACCTGCATCTCCATCATCACGGCCACAAT
CAGCAACAGAATCAGCAGGGTGGCGGCGGTGACAACTATGAGAACCAGCA
GAATCTGCAGCACATCTCCGAGCGAGAGGCGCTGGAGGGCGAGGAGGATC
CGTCGGTCGATCCCACTGCAACCACCGTGTTCCTGGAACGATCATAGGTG
GAGAACGGCGGCGTGACCCGCCTGCGTTCGCAACAGCAGATTGCCCAGCT
GGCGGGCAGCGGCGGCGGAGGAGGCGGCGGCGGTGGCGGCGGCAGTACTC
CCGGTGGCAATAGTTGCGGATGTGGTGGCGGCATGAAGAAGAGCTCCTCC
TGCTCGACCATCTATCTGGACGACAACGCTGAGGCGAAGCCGAATCTTAA
GAATACGGTCTAATGCGTCTCACTGGCCATTTACTATCACATCAAGAATC
GGCTATCGGATCGCCGGCTGGACATCTTCAACGAGAAGCTTCATCCGGTG
ACCCACGACCAGGTGCCGGATAACTATGACACGCGCTATCCGGAACACCG
GCAGATCTACAATTTCGTGCGCACGCTCTTTAACGCCGCCCATCTGACAG
CCGAGTGTGCGATCTTACGCTATGCTACCTGGAGCGGCTACTCAACTACG
CCGAGCTG
FMO06107.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:33:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycY-RB | 2553 | CG14939-RB | 308..1108 | 9..808 | 3395 | 95 | Plus |
| CycY-RA | 2148 | CG14939-RA | 308..1108 | 9..808 | 3395 | 95 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:33:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11811631..11812431 | 808..9 | 3370 | 95 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:33:40 has no hits.
FMO06107.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:56 Download gff for
FMO06107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycY-RA | 304..1108 | 1..808 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:01:51 Download gff for
FMO06107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14939-RA | 324..1128 | 1..808 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:56 Download gff for
FMO06107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycY-RA | 304..1108 | 1..808 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:56 Download gff for
FMO06107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11811631..11812435 | 1..808 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:56 Download gff for
FMO06107.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11811631..11812435 | 1..808 | 94 | | Minus |
