FMO06119.5prime Sequence
1068 bp (901 high quality bases) assembled on 2008-09-15
> FMO06119.5prime
CAGTCGACATGGCAACACACCTCCTCCGAAACGGCGCTACATGTTGGCTG
CTCAGGAACTGCATTTCCCAACGTGCCGCGTTGAGACGCTGCCTGCATGT
GACCTCAAGCCTGGACAAGACGGTCTCCTTCAACCTCAGCGACATTGGCG
AGGGAATCCGCGAGGTAACCGTCAAGGAGTGGTTCGTGAAAGAGGGCGAC
ACCGTGGAGCAGTTCGACAATCTCTGCGAGGTGCAATCGGACAAGGCATC
GGTGACCATCACCAGTCGCTATGATGGCAAGATAACCAAGATTCACCACA
AAATCGATGAGATTGCTCTGGTCGGCAAGCCTCTGCTCGATTTCGATGTG
GTGAATGAAGACGAAGATGAGCCGGAGGACTCTTCTTCCTCTTCCTCCTC
CACATCTTCCGATAGTTCAGCAAGCGAAAACGAGGAGAAGCAATCAGCTG
AAGCATCTGCGACGCCCACAGAAGGTCGTGTGATCATACCCGCCACGCCC
TCGGTTCGTCGTCTGGCCAAGGAACACCAGTTGGATCTGGCCAAGGTGCC
AGCAACGGGAAAGAATGGTCGTGTGCTTAAGGGTGATATTCTGGAGTTTC
TGGGCCAAGTTCCTCCCGGTACTAACGTTCCACATCCCACACTATTGGCG
AAAACGCCTAGTGCTGCTCCAGTGGAGCAGCAAGTGTTTCTGTGCCCGCT
GATCGCGTCGAAGTGCTCACGGAGTGCGCAAGGCCATGCTGAAATCGATG
ACGGAATCCCTGAAAATCCCCCATTTTGCTTACAGCGACGAAATCGACAT
GACCCAGTTGATGCCATTTCGTACCCATCTGCAGTTAGTGCCAAGGAGAA
TGGCGTGCCCAAGCTCACGTTCATGCGTTCTGCATCAAGGCTGCTAGCAT
TGCCTGGCCCAATATCCAAATTGTTAACAGCTCCCTGGATTTGGCCAGCG
AATCGCTGGTCTTCAAGGTGGCACAACATAGCGTTGCCATCCAATACCCC
AGGTTCTAGTGGTGCCTAATATTAGACTGCCGACAAGACTATTACCAATT
GCCAAGAACTGAATGCCA
FMO06119.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5599-RA | 1872 | CG5599-RA | 103..1175 | 9..1066 | 4720 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15086802..15087486 | 80..762 | 3310 | 99.6 | Plus |
| X | 23542271 | X | 15087552..15087820 | 762..1024 | 790 | 92.2 | Plus |
| X | 23542271 | X | 15086227..15086303 | 9..85 | 370 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:52:00 has no hits.
FMO06119.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:17 Download gff for
FMO06119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5599-RA | 96..1150 | 1..1044 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:02:04 Download gff for
FMO06119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5599-RA | 83..1137 | 1..1044 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:42:47 Download gff for
FMO06119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5599-RA | 96..1150 | 1..1044 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:42:47 Download gff for
FMO06119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15086220..15086298 | 1..80 | 95 | -> | Plus |
| X | 15086803..15087486 | 81..762 | 99 | -> | Plus |
| X | 15087553..15087844 | 763..1044 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:17 Download gff for
FMO06119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14980253..14980331 | 1..80 | 95 | -> | Plus |
| arm_X | 14980836..14981519 | 81..762 | 99 | -> | Plus |
| arm_X | 14981586..14981877 | 763..1044 | 91 | | Plus |
