FMO06123.5prime Sequence
1137 bp (960 high quality bases) assembled on 2008-09-15
> FMO06123.5prime
CAGTCGACATGTCTATGTCAAAAACGACTAACACCTATAACCGGCAGAAC
TGGGAAGATGCTGAATTCCCAATTCTGTGCCAAACTTGCCTTGGCGACAA
TCCGTACGTGCGGATGATTAAAGAGCGGTTCGGCAAGGAATGCAAGATAT
GCACGCGTCCATTCACAATATTTCGATGGTGTCCTGGTGCTCGTATGCGC
TTCAAAAAGACGGAGATATGTCAAACGTGTGCGCGCCTGAAGAACGTGTG
TCAGACCTGCCTCTTGGACCTGGAGTACGGACTGCCGATTCAAGTACGAG
ATGCGGCGCTCAAAGTGGCTGACAATATGCCACAAAGCGACGTTAACAAG
GAATACTACATCCAAAACATAGACGCCCAGCTGCAGGACGGAGATGGCAC
GGAGGCGGCAGGAGCTGTCGGTCGATCCCTCGCCGCCAACGAGATGTTGT
CCAAGCTTGCGCGCACAGCACCCTATTACAAAAGAAATCGGCCGCACATC
TGCTCCTTTTGGGTTAAGGGCGAGTGCAAGCGTGGAGAGGAGTGCCCATA
CCGCCACGACAAGCCCAACGAGCCGGACGATCCGCTATGTGAGCAAAACA
TCAAGGACAGGTACTACGGACGCAACGATCCTGTGGCCGAGAAGATCATG
AAGCGTGCAGCCTCGCTTCCCACACTCGAGCCGCCGGAGGACCGCAACAT
CACAACTCTCTATGTGGGGAACCTTCCTGAAGAAATCACGGAAACCCGAG
GCTGCGAGATCAGTTCTACCAGTTCGGCGAAATTCGATCAATTGCGCTGG
TGCCACCGCCAGCAGTGCGCTTTTGTGCAATACACCAAAAGAAACGCTGC
CCGAGCTGGCTGCTGAGCGGACCTTTAATAAACTGGTGATCAGGGCCCGG
AAGGTGAGCATTAAGTGGGCTCACTCTCAGGCAAAGCATGGCACCGCTGC
AAAGACAGACATACGCTTTCGACTGGGCCGGCATTCCACCGCCTACGCGA
AGCCCAACGACTACTTCATCTTTCGCCAGAACCAATCAATGTCCATGCCC
GCCGGCATGAAGCTGCATCAGTTGCCATCAAATTTAGTCCGGGGTCGGCT
ACCAATGTATTGCCAGCCTACTATGCAGTCCCTACGA
FMO06123.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14641-RA | 1564 | CG14641-RA | 101..1229 | 9..1136 | 5125 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4231167..4232242 | 1088..9 | 4830 | 98.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:08:52 has no hits.
FMO06123.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:28 Download gff for
FMO06123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14641-RA | 101..1213 | 9..1122 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:01:57 Download gff for
FMO06123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14641-RA | 114..1226 | 9..1122 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:41 Download gff for
FMO06123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14641-RA | 101..1213 | 9..1122 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:41 Download gff for
FMO06123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4231130..4232242 | 9..1122 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:28 Download gff for
FMO06123.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 56852..57964 | 9..1122 | 97 | | Minus |
