FMO06128.5prime Sequence
1165 bp (995 high quality bases) assembled on 2008-09-15
> FMO06128.5prime
CAGTCGACATGCTGGCCAACTCATGCTGCGGTTGGAGAAAATATAAAACC
CATGATCAGCATCATAGAACCCTAAAGAAAAAAACTCGACAGAACACATC
AGATACAACAGTTCACATAGAAGTGAACTCCAACGAAATCCAGTTTCCAG
GTTCTTACAGATTTAATCTTGACTCAAAAAAAATAAATATCGGGCGAATG
AATATTCTTGGACATAAGAGAGGTAATTTCCGTGTAACTCGATATGTCAC
GGTCACCGTACTCTTAATTTTATCGACTGCAGTCAATGCTTATGCTCAGC
CAGAAAATAAAAGCTTCAGTAATTCTTCCAACAACGATAGTCCGGAAATG
GTTATGTTGAGTAACGAAACAAACAATAGTGCAAAAGTACTATCAGAAAA
AAATGGTTCTTCTTCAATATCGGCGGATGATAAAATAAATGAAAATATGG
GAATATTCCAAATGAAAGTACAAAGTAAACCGGGGAAAAAAAGTACCCCT
TTAGCAAAGGTATCAGAGCATGGAGATTTATCAAGAGTTCAAAGTGTATC
TTTGTATCGCAATACCTTAATAAATATAGAAAGTATGCTACAGCGTCAGT
TGCGTGAGAAAGCCAAAGTGGATAGTATAGAATCGATTAAAATGCACATA
CTTATGCGCTTGAATTTAAAAAAACTTCCCAATATAACAAAACCAATTTC
AGTACCACAAAATATAATAGATAACTTTTATAGAGATTATAATGCATCTT
CAAAAACTACTGTTTGGAATCGCATGGAAAGCATTGACGAATCTCATTTG
TCTATAAATGACACTTATGGCGACCACATAATGACTGATTTTTTTGATGA
AAGTTCATCCTCCCAAATGCAAGGAGATGATGCTAACACTGTTAATGAAT
TTCTGATAGATTGAATAAAATCAAGCTAAAGGTCGGACATTCCTATTAAT
ACCACGATGAGGAGTCGAGAGTATTTTGTCTCACATCAGCAGTATATCAT
ATTTCCCGAGGAAATTCAACCTCTGTTCGGCACAATCGCAGGGCCCATGT
TTTTCGTTCAAATGACAGTACTACTCGACTTGTCTTACGCTACCCTTCAT
CTATATTTACGGGTTGGGAATGGGAAAATGTCACTCACCTGGCATTCTTT
GAAAATTAAACACGC
FMO06128.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| myo-RD | 3612 | CG1838-RD | 510..1638 | 8..1123 | 5240 | 98.3 | Plus |
| myo-RC | 3056 | CG1838-RC | 869..1997 | 8..1123 | 5240 | 98.3 | Plus |
| myo-RA | 2896 | CG1838-RA | 386..1514 | 8..1123 | 5240 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 693381..694390 | 1011..8 | 4720 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:20:26 has no hits.
FMO06128.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:41 Download gff for
FMO06128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myo-RA | 386..1538 | 8..1147 | 97 | <- | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:02:18 Download gff for
FMO06128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myoglianin-RC | 863..2015 | 8..1147 | 97 | <- | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:41 Download gff for
FMO06128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| myo-RA | 386..1538 | 8..1147 | 97 | <- | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:41 Download gff for
FMO06128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 693381..694390 | 8..1011 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:41 Download gff for
FMO06128.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 714007..715016 | 8..1011 | 99 | | Minus |
