FMO06129.5prime Sequence
1131 bp (1012 high quality bases) assembled on 2008-09-15
> FMO06129.5prime
CAGTCGACATGGCCAAGCGACAGACTTGGGAGCAGATGCGCCAGATCTTT
GTCCAGGCGGTAAACGCAGTGCATCCCGAAAAGGTATTCGCTGACTTTCA
AAAGTTCGATTTGCGGCCTCAAATCGGGGAAAACGCAACGGATATATCCA
TAAAACTCAATGGAGAGCGCCAAGACATCAGCGGCAAGACCTGCCACATA
GTGGGGTTTGGCAAAGCAGTCCTGGGAATGGCCAACAAAGTGCAACAGGA
TTTGGGAGCCACCTCGGCCGGTGGAGTCCTCAGTGTACCGGTAAACACCC
TGAAGCAGTTCCAACAACCGGTGGCACCTGGTTTGGTTGTCCACGAAGGA
GCAGCCAACAATCTGCCGGATGAGAATGCTCTCAAGGCAGCCCGGGAAAT
CAAGCAGCTGGCCGAAAAGATGACTGCCCAGGACATCCTCTTCGTCTTCA
TCTCCGGTGGCGGTTCTGCCCTTTTGCCCTTGCCCCGGTCACCTTTGACG
CTGGAGGACAAGCGCAGCATAGCGGATAAGCTCATGAAGCGGGGAGCCAG
CATACAGGAGATCAATGCTGTCAGGATTGCTTGCTCGGACATAAAGGGCG
GTCGCTTGGCCAGGTTGGCCGGCCAGGCGGGACTCCTGGTGACCTTTGTG
CTCAGCGACATCATCGGTGATCCCTTGGAGCTGATAGCCTGCGGTCCCAC
CATACAACCCGAGGCGGCAGCATCTCCATCCGACATCCTTAAAAGCATCA
TGTGTGGGAGGAGCTGTCCCCCGAGATTCGGCGGGTCTTTGAGCAGCCGG
AGGAGCAGAAGAACACATCGCTGCCCGAGCACAAGGTTTTTGTGGTGGGC
AGCATGTGATAGCCACTTCCACAGCGGCTCATGAGCCGAAAGGCTGGGCT
ACATTCCGTGCGTGCTCAGTTGTGCTGTCAGGGAGATGTGGCTCAGTGGC
TGGCGACTATCAGAGATTGCTGCACGGTATCCAAGAGCCAGCAGCATGCC
TACTGGATCTCAACTCAGAGAAGTACGCTTGGGGAAGAGAGTATCGACTT
TCGAAGGCCCTAAGACACATTGACACAGAGCCACGTTCCTGATCTGTGAA
GGGAGCCAGTCATAGTTCTGCATGATGGAGG
FMO06129.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9886-RB | 3762 | CG9886-RB | 67..1196 | 9..1113 | 4900 | 97.1 | Plus |
| CG9886-RA | 2025 | CG9886-RA | 67..1196 | 9..1113 | 4900 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2420896..2421879 | 9..987 | 4655 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:46:04 has no hits.
FMO06129.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:49:51 Download gff for
FMO06129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9886-RA | 63..1046 | 1..983 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:02:20 Download gff for
FMO06129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9886-RA | 85..1068 | 1..983 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:46 Download gff for
FMO06129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9886-RA | 63..1046 | 1..983 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:46 Download gff for
FMO06129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2420892..2421875 | 1..983 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:49:51 Download gff for
FMO06129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2420892..2421875 | 1..983 | 99 | == | Plus |
