FMO06136.5prime Sequence
1051 bp (795 high quality bases) assembled on 2008-09-15
> FMO06136.5prime
CAGTCGACATGGCTGGCGGCAACACCCCGCGTGTGATCCAGGTGACCAAC
ATAGCGCCGCAGGCCACCAAGGACCAGATGCAGACGCTGTTCGGGAACAT
TGGCAAGATAGAGGAGATCCGCCTGTACCCGACAATCCGTGATGTCTCCT
GTCCGGTGCAGTCGCGCATCTGCTATGTGAAATACACGGACACGACCAGT
GTGCCGGTGGCCCAGCACTTGACCAACACGGTGTTCATCGATCGCGCCCT
AATTGTCATACCCGTTCTGGCCATACCCGAGGAGTATCGGGCCCTGGAGA
TGCTCAAGAACGGAACCATTGTGCCGGGACTCCAGAAGCCGGACTCCAAG
CTACCGCCCGAAGTCATTAACCGCATCGAGGGACAGCTGCCGCAGCAAGT
GATCAAGACGTACGACCCCAAGTTGGTGGAATTCAATCTGCCGGAGTACC
CGGCCTTACCCTCGTTCTACGATGCGCGCAAAATCGAGGAGATTCGGCGC
ACCATTATCGTGTGCGATGTTAAGAACGAGTGGCGGCTAGACGATCTGAT
GGAATGCTTTCAGCGCGCTGGGGAGGTGAAGTATGCCCGTTGGGCCGAGA
AGGATAACAAGACGTACTGCATGATTGAGTTCTGCGAACAGACCAGCATT
ATTCACGCCCTGCGCATGCAGGGCCAGGAGTTCAAGGGTGGCCATCTAAG
CGTCTACCACTCCACGTATTCCATAACCAAGCCCGGAGGCAAAGTCGAAT
GATGCAGCGCAGCTGAGATGGAGGAGGCCATGACCTTTGTGAAAGAGGCC
AGAGTATGATCTCCGCGGCCATTGATCCGGTAATTGGAATGCTCGCTAAG
ACAAGCGCCGCAGGTCGAGATCACGGTCCCGTTCCCGGGACGTCCACCAG
TCGATCCCGCTCGCATCTTCACTTCAGACACGTTCCAGGCGTTCGGGTTC
AGAGAGCGAGTAGTGGGTCCCGATCACGCGCTTAGGTCGCGGGCAAGCAC
TCGTCCGATTCGCAACTACGCTCAGAATACATCTCGTTCCAGTTCCCTCG
G
FMO06136.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Srp54-RA | 2134 | CG4602-RA | 136..1148 | 7..1006 | 4575 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9913046..9913960 | 7..917 | 4220 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:04:37 has no hits.
FMO06136.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:51:33 Download gff for
FMO06136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Srp54-RA | 129..1158 | 1..1014 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:02:13 Download gff for
FMO06136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Srp54-RA | 133..1162 | 1..1014 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:38 Download gff for
FMO06136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Srp54-RA | 129..1158 | 1..1014 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:38 Download gff for
FMO06136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9913039..9914068 | 1..1014 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:51:33 Download gff for
FMO06136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9913039..9914068 | 1..1014 | 97 | | Plus |
