FMO06137.5prime Sequence
573 bp (333 high quality bases) assembled on 2008-09-15
> FMO06137.5prime
TAGCGGTTGCTCTATTGGCCACGGCCCTGGTTTTCATTCTCCGGACGGAT
GAAAAGGATGCCGACGACTCTGACTCAAACTCAAACAATGCCATCGATTT
GGAGGATGTGCTAAGTGGTCAACTATATGCCAAGCGATTCAACGGCAGCT
GGAGCAATGGAAACAGTCTCATTTACAAGGAGAATACGTCCATCATGGAG
TTCGATGCCAAGACGGGTGAACGTTCCATCCTGCTGGAAGATGCGCAACA
TTATGTCCTGTACGAAAAGTCCGCCGATGGGGAGTTCCTTTTGCTGGCAA
AGAACTACAAGAAGAACTTCCGGTACAGCTTTCTAGCTGAGTACGATCTG
TACAATCTGAACACAAAGAATTCATCCAGTTGACCATCCAAAACGAGCAG
CACTACCTGAGCATGGTCCAATGGTCACCGGTGGGAAATGCCCTTGTGAT
CAATTACGATCGGAATCTGTACTACAAGGAGAGTGCATTGGCGCAGGAGA
TTGCCCTCACTAGCGATGAACAAGCGGGTATACTGAATGGCATTCCCGAC
TGGGGTGTACGAGGAAGAGGATT
FMO06137.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:50:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ome-RH | 3263 | CG42280-RH | 196..765 | 1..570 | 2790 | 99.5 | Plus |
| ome-RG | 4070 | CG32145-RB | 1003..1572 | 1..570 | 2790 | 99.5 | Plus |
| ome-RF | 3356 | CG32145-RA | 289..858 | 1..570 | 2790 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:50:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14744530..14744912 | 188..570 | 1805 | 99.2 | Plus |
| 3L | 28110227 | 3L | 14744256..14744443 | 1..188 | 940 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:50:53 has no hits.
FMO06137.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:28 Download gff for
FMO06137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ome-RF | 289..862 | 1..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:02:35 Download gff for
FMO06137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ome-RE | 1013..1586 | 1..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:52 Download gff for
FMO06137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ome-RF | 289..862 | 1..573 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:52 Download gff for
FMO06137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14744256..14744443 | 1..188 | 100 | -> | Plus |
| 3L | 14744531..14744916 | 189..573 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:28 Download gff for
FMO06137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14737356..14737543 | 1..188 | 100 | -> | Plus |
| arm_3L | 14737631..14738016 | 189..573 | 98 | | Plus |
