FMO06146.5prime Sequence
702 bp (-60 high quality bases) assembled on 2008-09-15
> FMO06146.5prime
CTGCAGCCACCACCACCAACACGATGGTGGTGAAGCGGCCAGGACCACCA
GTGCCGCCCAGGCCCAAAGCAGCAGCTCAACTGGCCAATGGAGCAGGAGC
CCCTCCGATCATTCAGAAGAAGCCCACCTTCGTGAGCCAGCTGAGTGCAG
TGGGTCGTACCTTGGTCTACAAGTCGCCAACGGTCAATCTGCCCAAGAAA
CAGGCCCAGACCCAGACGCCCACCACGGCGGTGCCAACGCCGCCGGTGAA
GCCCCTGAAGCTGCGCAAGGCACCGGATGTGCCCACGGCCAAGCCCAGGG
ATTCAATGACCTCGGTGGTCACGGTCAACCGGCATAACTCGATAAGCGTG
ATCGGGAGCACGCCACAGACCACACCCCGCAAGGACACCCGCTTGAGCCT
GGGAAAGGTGGACTTCGAGAGGGCGGGCCTCCAGCCGGCCAGTCAGCCAC
TTCCCAGGCCACGGAAAATTGTTCAAGTGCCCGTGGCCACTCTATATGTG
GAAGACATACCAGTGGTGGCTCCCAGCCCATCATCAAATGGACTCTTCAG
GCGATCAAAGACCACCCTGGATGGCAGCCAGAAGGATTCGGCATCCTCCC
CGCACATTGGAGGAGGATTCCTGTCCGGACGGACCGTGGAGATCAAGAAT
AATCTGAAGAACGCCGCCGAGCGTTTGTTCTCGGAGATATTCATCAACCA
GA
FMO06146.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31038-RE | 3335 | CG31038-RE | 527..1226 | 3..702 | 3440 | 99.4 | Plus |
| CG31038-RD | 4246 | CG31038-RD | 1338..2037 | 3..702 | 3440 | 99.4 | Plus |
| CG31038-RB | 3498 | CG31038-RB | 590..1289 | 3..702 | 3440 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:52:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29878396..29879095 | 3..702 | 3440 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:52:03 has no hits.
FMO06146.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:20 Download gff for
FMO06146.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31038-RB | 588..1288 | 1..701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:02:27 Download gff for
FMO06146.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31038-RB | 564..1264 | 1..701 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:42:50 Download gff for
FMO06146.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31038-RB | 588..1288 | 1..701 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:42:50 Download gff for
FMO06146.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29878394..29879094 | 1..701 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:20 Download gff for
FMO06146.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25704116..25704816 | 1..701 | 99 | | Plus |
