FMO06157.5prime Sequence
1152 bp (981 high quality bases) assembled on 2008-09-15
> FMO06157.5prime
CAGTCGACATGTCAGCGGCTGGTAGATCGGTGGACGATCCCGGCCAGAGC
CCACTCGTAGACCAAGAGCCGGATCCGGGCCAATCAACGCCAGCGGTGGC
CGAAATCGCCGCTTCCAGTATTCGATCGGGCCTGGCGGAGCTGGAGCTGC
GATCTTCGCAGGTGCTGCAGCGCTTAGAGAACGTTAAGGTGTCGACCACG
CCGGAGAGCCCAAATCCCGTCGAGAACGAGGAAGAGGCTGGGGAGCGGGT
GACCAGCGAGGACCTCCTGCCAGCGAAGCATCGCGTGCCCTCCGACATTC
TTAAGTCGCTGGAGCAATTGGTTTCTTACACGGACAGCGACGATGATCCG
GAGTTCCCGCTGCCCGCCCTGGATGACGTCTCCCACTTGGCTCTCATATC
GCACAGCATTGTGGCCTATTTGTCGCATCTGGACCGTCAGCAACTGCTCC
GGGTGACGAACAGCATTTCCGGGGACGCCACCCGCTGGTTGGGCACGCTG
TTTCACTTTGCCCACCCGGCGAGCAGCTTCCATGCGGACAATGCAGACGC
GGTGCTGCGTACGGTGCGACTGGCCATCGTCGCCAGGTGTCCGGGGTACT
TGGAGGGTGGCATACCCGCCCTGGCGCAGCCTACGTTTTACATCTCGGAG
AATACGACGCCGATGAGGCTGCACTACGCATGCCGCCAGTTGGGCATACC
GCTGGAGGCTATTAAGGTCATTCCGGAGCACAGTCAGTCCGGGACAATGG
ATGTGACGCTGCTGCAAAAGCAAATTCAGCAGGATGTGGGCAATAACAGG
ACTCCGCTGCTGGTGGTCGCCGACATGGGAGCCTCGTTGTGTGGCTATGT
GGACAACCTGCTTCCGGCTGAGGGACGTATGCAAGGCGCACACATGTGGC
TGCCCGCCAGTGGCCACGGACTTGGCCGCCTTGGTGTGCGCCCAAAATCA
GGCATGTGGAGGAGTACTCCACTCGATGGCCCTGAAATTGGCAGCTGCTG
GGTGTGCCAGTCTGCCCATCGTCTGCTGCACCGTCGCTGAAAACAGCGCT
CTGAATGCTTCGAATCCGATCCCTACTGTCGCGTCGCTTAATGCCTGCCC
TGTGGGACAGTTGCAGGGCCTGGGCCGAAGGCATTGCGGACGCTCTGCAT
TG
FMO06157.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1486-RB | 3700 | CG1486-RB | 394..1552 | 8..1150 | 5120 | 97.2 | Plus |
| CG1486-RA | 3634 | CG1486-RA | 328..1486 | 8..1150 | 5120 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21324710..21325686 | 120..1086 | 4155 | 98.1 | Plus |
| X | 23542271 | X | 21324460..21324571 | 8..119 | 560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:09:18 has no hits.
FMO06157.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:36 Download gff for
FMO06157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1486-RA | 328..1440 | 8..1108 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:03:11 Download gff for
FMO06157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1486-RB | 392..1504 | 8..1108 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:53 Download gff for
FMO06157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1486-RA | 328..1440 | 8..1108 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:53 Download gff for
FMO06157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21324460..21324571 | 8..119 | 100 | -> | Plus |
| X | 21324710..21325710 | 120..1108 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:36 Download gff for
FMO06157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21195487..21195598 | 8..119 | 100 | -> | Plus |
| arm_X | 21195737..21196737 | 120..1108 | 97 | | Plus |
