FMO06172.5prime Sequence
1192 bp (1037 high quality bases) assembled on 2008-09-15
> FMO06172.5prime
CAGTCGACATGTCCTCGCTCTCTGCGTCCGCGGAGAATGTGTCCAGTTTG
GGACTGGGATCGGGCGGAGGAGGAACTACTTCCCACGACGGCAACTCCCA
GCAGGGTTCCGGATCCGACGGAGGATCCAGTATGTGCCTGGAACTGGCCC
TCGAGGGTGAACGCCTCTGCAAGGCGGGTGACTGCCGGGCGGGCGTGGCC
TTCTTCCAGGCGGCCATTCAGGCCGGAACCGAGGATCTTCGCACTCTGTC
CGCCATCTACTCCCAGCTGGGCAACGCCTACTTCTACCTAGGCGACTACA
ACAAGGCGATGCAGTACCACAAACACGATCTTACGCTGGCCAAGAGCATG
AACGACCGACTGGGCGAGGCCAAGTCCTCTGGCAATCTGGGCAACACCCT
CAAGGTAATGGGTCGCTTCGACGAGGCGGCCATCTGTTGCGAGAGGCACC
TAACGCTGGCCAGGCAGCTGGGAGATCGTCTGTCCGAGGGACGCGCTCTT
TACAACCTAGGAAATGTCTACCACGCCAAGGGCAAGCACTTGGGTCAGAG
AAACCCTGGAAAGTTCGGCGACGATGTCAAGGAGGCGCTCACCCGTGCCG
TGGAGTTTTACCAGGAGAATCTGAAGCTCATGCGGGATCTGGGTGATCGT
GGTGCTCAAGGTCGAGCTTGTGGTAATCTGGGAAATACCTACTACCTACT
AGGCGATTTCCAAGCGGCCATTGAGCATCATCAGGAGCGACTGCGCATTG
CCAGAGAGTTTGGTGATCGCGCGGCTGAGCGAAGGGCCAACAGTAATCTT
GGCAACTCGCACATATTCCTGGGACAATTCGAGGACGCCGTCCGAACACT
ACAAACGCACCTTGGCTTTGGCCCGTTGAGTTGGGTGAACGCGAAGTGGA
AGCCCAGAGTTGCTACAGCTTGGGCACACCTACCACGTTGCTGCACGAGT
TCAACACTTGCCATCGAGTATCACAATCGACACTTGCCATTGCCCAGGAA
TTGGGCGATTCGAATTGGTGAGCCAGGGCCTGCTGGTCCACTGGGCCATG
TCCCACTCTGCCATCGTGTCTATGAACGGGCCCTTAAAGTAATGCCGAAA
CAGCATCTTTCAACTGGCAAGGAAGCTGCCCGACCCGGTGGGGTGAAAGT
CACGCCAGGGTGAACTCTCGAATCTCAAAGCTACTCGAATGG
FMO06172.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pins-RA | 3279 | CG5692-RA | 249..1422 | 9..1187 | 5200 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27583088..27584236 | 9..1165 | 4775 | 96.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:35:59 has no hits.
FMO06172.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:39 Download gff for
FMO06172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| raps-RA | 242..1302 | 1..1066 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:03:15 Download gff for
FMO06172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| raps-RA | 277..1337 | 1..1066 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:10 Download gff for
FMO06172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pins-RA | 242..1302 | 1..1066 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:10 Download gff for
FMO06172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27583081..27584141 | 1..1066 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:39 Download gff for
FMO06172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23408803..23409863 | 1..1066 | 98 | == | Plus |
