FMO06188.5prime Sequence
920 bp (920 high quality bases) assembled on 2008-09-15
> FMO06188.5prime
CAGTCGACATGGCCAACTTAAGCTGGCTGATCACCATCACCACCACCTCC
TCCTCCATCAGCACCAGCCAGCTGCCATTGGTCAGCACAACCAACTGGAG
CCTAACGTCGCCGGGAACTACTAGCGCTATCTTGGCGGATGTGGCTGCAT
CGGATGAGGATAGGAGCGGCGGGATCATTCACAACCAGTTCGTGCAAATC
TTCTTCTACGTCCTGTACGCCACGGTCTTTGTCCTGGGTGTCTTCGGAAA
TGTCCTGGTTTGCTACGTAGTTCTGAGGAATCGGGCCATGCAGACTGTGA
CCAATATATTCATCACGAATCTGGCCCTGTCGGACATATTGCTCTGCGTC
CTGGCGGTGCCATTTACTCCGCTTTACACGTTCATGGGTCGCTGGGCCTT
CGGCAGGAGTCTGTGCCATCTGGTGTCCTTTGCCCAGGGATGCAGCATCT
ACATATCCACGCTGACCCTCACCTCGATTGCCATCGATCGGTACTTCGTT
ATCATATACCCCTTCCATCCGCGCATGAAGCTCTCCACCTGCATCGGGAT
CATAGTGAGCATCTGGGTGATAGCCCTGCTGGCCACCGTTCCCTACGGCA
TGTACATGAAGATGACCAACGAGCTGGTGAACGGAACGCAGACAGGCAAC
GAGACCCTGGTGGAGGCCACTCTAATGCTAAACGGAAGCTTTGTGGCCCA
GGGATCAAGATTCATCGAGGCGCCGGACTCTACCTCGGCCACCCAGGCCT
ATATGCAGTGATGACCGCCGGATCAACGGGACGGAGATGCCCTATGTGCG
GGTGTACTGCGAGGAGACTGGCCATCGGAGCAGTACCGGAAGGTGTTCGT
GCCATCACAACACTCTGCATTGGTGCTGCCTTCTTCATCATCTCGATTTG
CTACCTGTGGAATATCGGTG
FMO06188.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sNPF-R-RB | 4374 | CG7395-RB | 355..1272 | 9..920 | 4335 | 98.7 | Plus |
| sNPF-R-RA | 3243 | CG7395-RA | 727..1644 | 9..920 | 4335 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20075006..20075915 | 911..9 | 4140 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:04:53 has no hits.
FMO06188.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:42:59 Download gff for
FMO06188.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sNPF-R-RA | 719..1644 | 1..920 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:03:52 Download gff for
FMO06188.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| NPFR76F-RA | 694..1619 | 1..920 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:54 Download gff for
FMO06188.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sNPF-R-RA | 719..1644 | 1..920 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:54 Download gff for
FMO06188.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20074998..20075922 | 1..920 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:42:59 Download gff for
FMO06188.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20068098..20069022 | 1..920 | 98 | | Minus |
