FMO06194.5prime Sequence
983 bp (-73 high quality bases) assembled on 2008-09-15
> FMO06194.5prime
ATAAAACCAAGTTATCAGTCGACATGGCCATGCACTCGTACCTGCGCCAG
GGATCGGGTTCCGGAGGAGGAGCAGGAGCAGTCGCAGCTGGAGCACCGCC
GCTGGCCAGCCCGGACGAGATGCACGGCTTCCTGAACGACAAGCAGGCTT
GGGAGCACGCCATATCCCTGTACCAGGGTCCTGATCCACTCGATCATTGG
TACAACTACATCTGCTGGTACGAGAATCACGCGCAAAGCGATCCGGAGCT
AAAGTACCGCGAAACTCTGGAGCGCTGCCTGACGGTGTATGAGCACAATG
ACTACTATCGCCAGGATGTCCGTTTGGTGCGGCTGTGGCTGAAGTACATA
GCCATGCAAACGGATCCACTCCATTTCTACCAGGTGCTTTTTCAGCGAGG
AACTGGTCGCCAGGTGGCCGCCTTCTACATTGGATGGGCTGCCTATTACG
AGTCTCGCGAGGAGTATAAGGATGCGGAGGCGGTGTTTAACTTGGCCTTC
CAGGAGAAGGCGCAGAGCACTTCCGAGCTGCAGCACGCCCACACCAAGTT
CGCCTATGCCAGGTCTCTTTTTTACCAGCGGCAACAGCAGCAACAACAGC
AACAACAGCAGCACCAGCAACATCCCCCGCAGGATGCACTGCAGCAACTC
ACGAACTATGCACAGCAGCAGATGCCACAGAGCTATAATCAACACCGTCT
CCCAGCCATATCAGCAGAATGTCTATCAGCAATATCATCCGCAGGCGCAG
GCACATCAAGCCCCACAGCCTCATCAGCCCGGCGCCACAACAGCAACTGC
CGCAGAACAACAGGTCCCCTATCAGACACACTACCAGGAGCGCCGCGCTA
ATGAACCACATCCTGCAACTCAGTCCCCAACAACAATACCACTATCCCAA
GTCCAGCAACAATTCGCATTATGCTCCTGGTGGCAAATCCCATTATGCAC
CAGCCCATCAGTCACGGTTGCCGCCGCACCAAC
FMO06194.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:40:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bub1-RB | 4091 | CG14030-RB | 304..1264 | 20..982 | 4510 | 98.3 | Plus |
| Bub1-RC | 3998 | CG14030-RC | 492..1452 | 20..982 | 4510 | 98.3 | Plus |
| Bub1-RA | 3810 | CG14030-RA | 304..1264 | 20..982 | 4510 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:40:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5279356..5280263 | 20..929 | 4200 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:40:04 has no hits.
FMO06194.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:54:40 Download gff for
FMO06194.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bub1-RA | 304..1264 | 20..983 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:04:01 Download gff for
FMO06194.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bub1-RA | 306..1266 | 20..983 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:14:11 Download gff for
FMO06194.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bub1-RA | 304..1264 | 20..983 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:14:11 Download gff for
FMO06194.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5279356..5280271 | 20..937 | 98 | -> | Plus |
| 2L | 5280328..5280372 | 938..983 | 91 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:54:40 Download gff for
FMO06194.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5279356..5280271 | 20..937 | 98 | -> | Plus |
| arm_2L | 5280328..5280372 | 938..983 | 91 | | Plus |
