FMO06204.5prime Sequence
419 bp (339 high quality bases) assembled on 2008-09-15
> FMO06204.5prime
GCAGCAGGAGCGAGCAGGATAGCGGCTGTCATCGGCGTCTTTTCCTGTGC
ATTGCCAAGGCTGTGAAACATTCATTGATCTCTGCAACAATCTAGGTGCT
AACTGCAGCACGACGACAGCCACATCCCCGTCAACTTCCTCCTCCTCAGC
CAGCAGCACGCAGAACTTAATAGCAGTAGTGCCGCCACAGTTGCAGCAGC
TGCAGGTGCAATTACCGGCGCCAGGTGGAGGAGGAGGAGCAGGTGCAGGA
GGAGGAGGTGGTGGAGGTGGGGGAGCTGCGCCTGTGAGGCGCCACATCTC
GCATAAAACAGCCGTGAAGTTTTTGTACCCCCGTAAATTTGATTTTCCAC
GAGCAGTCTCACTGTACGAACAGCATGAACAGATCCGCCTGAAGGAGTAT
CTATATAACATCGATTCGG
FMO06204.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)G0232-RA | 3046 | CG32697-RA | 234..653 | 1..419 | 1985 | 98.3 | Plus |
l(1)G0232-RB | 2969 | CG32697-RB | 214..576 | 58..419 | 1700 | 98.1 | Plus |
l(1)G0232-RG | 5668 | CG32697-RG | 487..848 | 59..419 | 1695 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9644007..9644369 | 419..58 | 1675 | 98.1 | Minus |
X | 23542271 | X | 9650484..9650543 | 60..1 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:47:32 has no hits.
FMO06204.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:50 Download gff for
FMO06204.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0232-RA | 234..653 | 1..419 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:04:09 Download gff for
FMO06204.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0232-RA | 215..634 | 1..419 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:28 Download gff for
FMO06204.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0232-RA | 234..653 | 1..419 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:28 Download gff for
FMO06204.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9644007..9644367 | 60..419 | 98 | <- | Minus |
X | 9650485..9650543 | 1..59 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:50 Download gff for
FMO06204.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9538040..9538400 | 60..419 | 98 | <- | Minus |
arm_X | 9544518..9544576 | 1..59 | 100 | | Minus |