FMO06208.5prime Sequence
1162 bp (1015 high quality bases) assembled on 2008-09-15
> FMO06208.5prime
CAGTCGACATGGCGACAATGTTGACATCGGACGAGGCGGGCAAGCTGCTC
GACTTCTCCCAGAAGCTGGACATTAATCTGCTGGACAAGATCGTCGAGGT
TGTGTACACAGCGCAGGGCGAGCAGTTGCGTCTAGCCCAGAGCATACTGA
CCACGCTGAAGGAGCATCCAGAGGCATGGACGCGGGTGGACAGCATATTG
GAGTACTCACAGAACCAGCGGACCAAGTTTTATGCTCTGCAAATCCTCGA
GGAGGTCATCAAAACGCGCTGGAAGGTCCTGCCGCGCAACCAGTGCGAGG
GAATCAAGAAGTATGTGGTCAGTCTTATCATCAAGACCTCGTCGGATCCC
ATTGTTATGGAGCAGAACAAAGTGTATCTGAATAAGCTAAACATGATTCT
GGTCCACATTCTAAAGCGCGAATGGCCACGCAACTGGGAGACATTCATCA
GTGACATTGTCGGTGCGTCGAAAACGAACGAGAGCCTGTGCATGAACAAC
ATGGTAATCCTGAAGAACCTTAGTGAGGAGGTGTTCGACTTTTCGCAGGG
TCAGATCACGCAGACTAAGGCCAAGCACCTGAAAGACACCATGTGCTCGG
AGTTCTCTCAGATCTTTACACTATGCTCCTTCGTGCTGGAGAACTCGATG
AATGCCGCCCTAATCCATGTCACGCTGGAGACTCTGCTGAGGTTCCTTAA
CTGGATACCGCTGGGCTACATCTTTGAAACGCAGCAAATTGAAACGCTGA
TATTCAAATTCCTTAGCGTACCCATGTTCCGCAATGTGACCCTGAAGTGT
CTGTCCGAGATCGCCGGCCTGACTGCGGCAAACTACGACGAGAATTTCGC
GACGCTCTTCAAGGACACGATGGTTCAGTTGGAACAGATAGTCGGCCAGA
ATATGAACAATGACCATTGTGTTTAAGCATGGTTCCGACCAGAGCAGGAG
CTGGTCCTTAATTTGGCATGTTCCTGGTGCACCTTCTCAGGGAGCACGGC
AAACTGGTGGAGATGCAGTATGTGGACTACCTGAATCAGCCGCTCATGTA
TTTGGTGATGATTAGCGAAGGTGGGAGGACTTGAAGTATTCAGATCTGTC
TGGAATACTGGAACGCTTGGTGGAAGATCTATCAAATTCGGAATCTCCCA
CCCACCTGAAGT
FMO06208.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:05:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| emb-RB | 3919 | CG13387-RB | 372..1522 | 9..1153 | 5255 | 97.8 | Plus |
| emb-RA | 4492 | CG13387-RA | 372..1522 | 9..1153 | 5255 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:05:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8404288..8405428 | 9..1144 | 4965 | 97.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:05:15 has no hits.
FMO06208.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:20 Download gff for
FMO06208.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| emb-RA | 367..1504 | 1..1135 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:04:14 Download gff for
FMO06208.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| emb-RA | 365..1502 | 1..1135 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:44 Download gff for
FMO06208.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| emb-RA | 367..1504 | 1..1135 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:44 Download gff for
FMO06208.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8404283..8405420 | 1..1135 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:20 Download gff for
FMO06208.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8404283..8405420 | 1..1135 | 97 | | Plus |
