FMO06214.5prime Sequence
782 bp (782 high quality bases) assembled on 2008-09-15
> FMO06214.5prime
CTTATATTGAAGTTATCAGTCGACATGAGTGGCGAACGCCGCAGAACCAC
CACACACAGTATTGAGGTGCCATCGCAGCTGACGGCGCAGCACAATTCCC
GGAAACGTCCGCCCAGCGATCACCAGGACTACGGCAACTATCTGGAAACA
TGCCGTGCCGCCGAGATTCTGTCATCGATGAAGTTGCAGAGTCCGCATGG
CTCAATGGCCGACAAGTGCTCGAGTCCCGGCAGCAGCTCTTCGGCTTCCT
GGAGCTCCGGTTCCCCGTCGCCGCCATTGAGTGACGACGGCCACGCCCAC
CACAGCCCACACAATATCATGTCGCCCCACGATGCGGACAACGCACGCAC
ACGCACAGCATCCGTGTCCACGTCGGACGAGGGCATTGTCATCGACTACA
AGGAGGAGCGCAAGAAAAAGTCCAAAAAGTTCCGATGCGTCTATCGAGGA
TGTGTTGGCGTGGTAGACGATCTCAATGGAGTCGTGCGTCACATTAGGAA
AACACATTTGGGAAAGGACTCCCATCGCTCCGCGGATGATGACGGAAATG
AGGAGGACTTCTACCTCGAGGATGCCGACGACGACGTCGAGCAGGTGAAG
CCCACTCTGGCCTCCGAGCCGACTCTGAGTCACCGGGACATGGCGCGTCC
GCCGCACGAGGATCCCGAGTACCAGAAAGCAGATTGTTGGCAACTTCAAG
CAAGGACGCGGCGGTAGCCACTATAACCATCTAGCGCAGTCGCACGGACG
CACCATCAGTGGCAGCAAACATCCCGAGCACC
FMO06214.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glut4EF-RH | 10796 | CG34360-RH | 1651..2410 | 21..782 | 3760 | 99.7 | Plus |
| Glut4EF-RG | 4308 | CG34360-RG | 1651..2410 | 21..782 | 3760 | 99.7 | Plus |
| Glut4EF-RA | 4308 | CG34360-RA | 1651..2410 | 21..782 | 3760 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9943677..9943894 | 203..420 | 1090 | 100 | Plus |
| 3R | 32079331 | 3R | 9986647..9986834 | 512..700 | 895 | 99.5 | Plus |
| 3R | 32079331 | 3R | 9943481..9943587 | 96..202 | 535 | 100 | Plus |
| 3R | 32079331 | 3R | 9982277..9982370 | 419..512 | 470 | 100 | Plus |
| 3R | 32079331 | 3R | 9930471..9930545 | 21..95 | 375 | 100 | Plus |
| 3R | 32079331 | 3R | 9986897..9986978 | 700..782 | 365 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:37:17 has no hits.
FMO06214.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:01 Download gff for
FMO06214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glut4EF-RA | 1647..2410 | 16..782 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:21:55 Download gff for
FMO06214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34360-RB | 914..1677 | 16..782 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:40 Download gff for
FMO06214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glut4EF-RA | 1647..2410 | 16..782 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:40 Download gff for
FMO06214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9930467..9930545 | 16..95 | 97 | -> | Plus |
| 3R | 9943481..9943587 | 96..202 | 100 | -> | Plus |
| 3R | 9943677..9943894 | 203..420 | 100 | -> | Plus |
| 3R | 9982279..9982370 | 421..512 | 100 | -> | Plus |
| 3R | 9986648..9986833 | 513..699 | 99 | -> | Plus |
| 3R | 9986897..9986978 | 700..782 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:01 Download gff for
FMO06214.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5812619..5812700 | 700..782 | 98 | | Plus |
| arm_3R | 5756189..5756267 | 16..95 | 97 | -> | Plus |
| arm_3R | 5769203..5769309 | 96..202 | 100 | -> | Plus |
| arm_3R | 5769399..5769616 | 203..420 | 100 | -> | Plus |
| arm_3R | 5808001..5808092 | 421..512 | 100 | -> | Plus |
| arm_3R | 5812370..5812555 | 513..699 | 99 | -> | Plus |
