FMO06215.5prime Sequence
1162 bp (1018 high quality bases) assembled on 2008-09-15
> FMO06215.5prime
CAGTCGACATGGTGGATACAAACAGTTCAAATCCGGGAATCGTGGGTGGA
AACTCCGCCTCGTCCGCCAGGCTGAGGAGATTCGAGCGGACGGACAGTGA
GCTGGCCTGCGAGGAGGCGGCCAGGCTGACGGCGGAACAGAGTCCGGAGG
ACGAGGACAATCAGGACAACGACGAGGATGACGACGACGAGGAGAGCGTG
TACGGGGAACTGCCGCCTCCGCCGGACGGAGGATACGGCTGGGTCATCTG
CTTCGCCAGCTTCATGTGCAACATGATCGTGGACGGTATCGCCTACACGT
TCGGCATCTTCCTGGAGGAGTTCGTGGCCTACTTCCACGAGGGCAAGGGT
ACGGTGGCCTGGGTGGGCAGTCTTCTGTCAGGAGTCTACCTCAGCGCCGG
ACCTATCGTTTCCGCCCTGGCCAACAAGTACGGATGCCGAGCCGTCTGCA
TAGCCGGGAGCATAATCGCCTGCATAGCCTTCGTCTTGAGTACGTTCAGT
ACCAACGTGAGCATGCTGATGGCCACCTATGGCTTCATGGGGGGATTCGG
GTTCGGCATGATTTATCTGCCTGCTGTAGTGGCCGTGGGCTATTACTTTG
AAACCAAGCGGAGTCTGGCCACAGGAATTGCGGTCTGCGGCTCTGGCTTT
GGCACCTTCGCCTTTGCCCCGCTGGCCACCTATCTCCTGGAGGAGTACGG
CTGGAAAAACGCCCTGCTCATCTTTGCTGGCCTGATCCTCAACTGCGCCA
TCTTCGGAGCCATGATGCGGCCACTGACCTACCCGAAAAAGAAGAAGCAG
AAGCCCTTGATGCAAAGGATGTACGAGGAGAAGCAGCTGCAGCTGGAAAG
GGGTTCCCTTTGCGGGCTCCCACTTCATGGTGCCAGTTACCGGATGGAAC
CATCGAGCGGAAACTGAAGAATGCCGCTCAATGCGGATCCCGGTGTGCAT
TCAGCTTGAATCTGGAGCTGCTGGCCCAACAGCAGCGGCGGAGGTCTTGC
ATCCCGTCTCTACCTGCCCACATCACCGGAGTCCAAAGGTGTGGATGTTC
ATCGAACGACGGCGCGCCAATCTTCCACAATTGGCGACAGCATTGCCCAG
TTATCCGCTCGATCGCCCGCAGGTGCCCTCGGCCGCCGTCCCTCCAGGAA
CTCGGATTCGAA
FMO06215.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13907-RB | 3755 | CG13907-RB | 141..1294 | 7..1160 | 5245 | 97.7 | Plus |
| CG13907-RA | 4723 | CG13907-RA | 1109..2262 | 7..1160 | 5245 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 879752..880905 | 1160..7 | 4970 | 97.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:37:34 has no hits.
FMO06215.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:08 Download gff for
FMO06215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13907-RA | 1103..2264 | 1..1162 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:04:25 Download gff for
FMO06215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13907-RA | 963..2122 | 1..1160 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:48 Download gff for
FMO06215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13907-RA | 1103..2264 | 1..1162 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:48 Download gff for
FMO06215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 879750..880910 | 1..1162 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:08 Download gff for
FMO06215.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 879750..880910 | 1..1162 | 97 | | Minus |
