FMO06218.5prime Sequence
517 bp (-84 high quality bases) assembled on 2008-09-15
> FMO06218.5prime
CAGTCGACATGAAGCCGTTGCTCCAAGTGTTGGCACTTTGTGGGGCCCAA
GTCCATGCACACTCTGTGGGTCTACGGCCCGACTATAACGACTATAGCGA
CGAGGATACCAGAAGGGATTGGCTCCCCGAGCCGCTGAAGCCAGTTCCTT
GGCAGTCGGAGACCCGATATGCACAGCCCCAAGAAGCTGTGGTTCAAGCG
CCTGAAGTCGGACAGATCTTGGGAATTAGTGGCCATAAAACCATTGCCAA
TCGCCCAGTGAACGCTTTCTTGGGTATACGGTATGGCACGGTTGGAGGTG
GCTTGGCGCGCTTCCAGGCGGCACAACCGATTGGAAACCAGGGACGAGTT
AATGCCACCGTCCAGAGCCCCAATTGTGCCCTGTTTCCGGAGCTCGAACG
CCTGAGGTTATCTGAATCCAGGGGAAAAAACGTCCACCATTGCCTTACCT
TGGACATCTACGCACCCGAAGGCGCCAATCAGCTGCCCGTTTTGGTCTTT
GTTCACCGTGATTTGCT
FMO06218.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Glt-RD | 3260 | CG9280-RD | 49..553 | 7..511 | 2360 | 97.8 | Plus |
| Glt-RA | 3373 | CG9280-RA | 162..666 | 7..511 | 2360 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8673200..8673704 | 7..511 | 2360 | 97.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:47:39 has no hits.
FMO06218.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:54 Download gff for
FMO06218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glt-RA | 157..672 | 1..517 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:04:29 Download gff for
FMO06218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glt-RC | 195..710 | 1..517 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:33 Download gff for
FMO06218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Glt-RA | 157..672 | 1..517 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:33 Download gff for
FMO06218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8673195..8673710 | 1..517 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:54 Download gff for
FMO06218.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8673195..8673710 | 1..517 | 96 | | Plus |
