FMO06225.5prime Sequence
376 bp (216 high quality bases) assembled on 2008-09-15
> FMO06225.5prime
CCTCCATCTGAGCGGAAACGGAAATGGCAACGGGAACGGGAATGGGAACG
GCGAGAAGTCGCTGGGCGAAGCCAAGGCAGTGCAGGTGCCCAGTCATCCC
GTTGGACCCTCGACGGGAGTAGCCGCCGCCTGGCAGACCGCACCCTCGCA
GCATCAGCAGCACCAACAGCATCCCGGAGGATCTCCGCCCGGCGGTGGAT
CCTCGCCGCATGGCCATCGGTCCGCCGCATCGGCCGCTTTCGATGCCACC
ACCGTGCGGCTGAACAAGGAGATAGCGGATATGGCCCAGCTGGAGCGAGA
GCGACTAATGCTCCTGGCCCGCGCCAAGCAGACGGCGGAACAGCCGCCGG
CGGGTAGTAATCATCGCGGTCTTCCC
FMO06225.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:09:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| jeb-RB | 10378 | CG30040-RB | 1343..1718 | 1..376 | 1805 | 98.7 | Plus |
| jeb-RA | 4455 | CG30040-RA | 856..1231 | 1..376 | 1805 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:09:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12117623..12117998 | 376..1 | 1805 | 98.7 | Minus |
Blast to na_te.dros performed 2014-11-28 19:09:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2354..2394 | 133..173 | 105 | 78.6 | Plus |
FMO06225.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:15 Download gff for
FMO06225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| jeb-RA | 856..1231 | 1..376 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:04:37 Download gff for
FMO06225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| jeb-RA | 875..1250 | 1..376 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:19 Download gff for
FMO06225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| jeb-RA | 856..1231 | 1..376 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:19 Download gff for
FMO06225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12117623..12117998 | 1..376 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:15 Download gff for
FMO06225.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8005128..8005503 | 1..376 | 98 | | Minus |
