FMO06244.5prime Sequence
146 bp (146 high quality bases) assembled on 2008-09-15
> FMO06244.5prime
CAGTCGACATGCCTTGCCCATGCGGAAGCGGATGCAAATGCGCCAGCCAG
GCCACCAAGGGATCCTGCAACTGCGGATCTGACTGCAAGTGCGGCGGCGA
CAAGAAATCCGCCTGCGGCTGCTCCGAGGCAAGCTTTCTAGACCAT
FMO06244.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:05:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MtnA-RB | 700 | CG9470-RB | 126..245 | 9..128 | 600 | 100 | Plus |
| MtnA-RA | 329 | CG9470-RA | 126..245 | 9..128 | 600 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:05:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9783862..9783960 | 128..30 | 495 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:05:31 has no hits.
FMO06244.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:09 Download gff for
FMO06244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MtnA-RA | 118..254 | 1..138 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:05:01 Download gff for
FMO06244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MtnA-RA | 119..255 | 1..138 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:13 Download gff for
FMO06244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MtnA-RA | 118..254 | 1..138 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:13 Download gff for
FMO06244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9783853..9783959 | 31..138 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:09 Download gff for
FMO06244.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5609575..5609681 | 31..138 | 97 | <- | Minus |
