FMO06246.5prime Sequence
233 bp (233 high quality bases) assembled on 2008-09-15
> FMO06246.5prime
CTTATCAGTCGACATGTGCAACGGATGTGGATGCTGTGGACCCTGTAATG
AAACACCCTGCTGTGGCCCCCACAGTCCGCCATGCGGAGCCCCGTCTCCC
ATCCCGTGCTCTCCTGCTCCGGGCATGTGCTGTCCCCCTCTGCCCGAGGG
CGGCATTCCCGATCCCCGTGTCTGGAACTACTACAACACGCCCCCAACTT
ATCCATGTGGCTTCCGCAAGCTTTCTAGACCAT
FMO06246.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17376-RB | 518 | CG17376-RB | 158..360 | 12..214 | 1015 | 100 | Plus |
| CG17376-RC | 784 | CG17376-RC | 98..294 | 12..208 | 985 | 100 | Plus |
| CG17377-RD | 907 | CG17377-RD | 487..641 | 59..213 | 430 | 85.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6800487..6800683 | 208..12 | 985 | 100 | Minus |
| 2L | 23513712 | 2L | 6802059..6802187 | 187..59 | 420 | 88.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:48:11 has no hits.
FMO06246.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:51:12 Download gff for
FMO06246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17376-RB | 95..305 | 9..221 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:04:49 Download gff for
FMO06246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17376-RB | 95..305 | 9..221 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:45 Download gff for
FMO06246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17376-RB | 155..365 | 9..221 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:45 Download gff for
FMO06246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6800479..6800686 | 9..217 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:51:12 Download gff for
FMO06246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6800479..6800686 | 9..217 | 97 | | Minus |
