FMO06252.5prime Sequence
1177 bp (1030 high quality bases) assembled on 2008-09-15
> FMO06252.5prime
CAGTCGACATGGAAATGAAAATGGCAGAGGCCCAGGAAACCAAGGACTCT
TGCTCGACGATCGAAGGCCAGCTGCCAGCTGGACCTGTTCGTGCTGAAGA
TGAGGAGGAAGAAGTGGAGGTCGAACAAGAGCAGCAGGAGCTGCTAAGCG
AACGGTGGTCGCCGTTGGGAGCCAACTACGATGACGCGAATAGCGCCAGT
TCTGGCGTGGATTGCGAACTAGAACCAGGACTGGAAAAGTCAGAAGCGCG
ACGTGGAAGCACTGGCAGCGAACTGGCCCGTCTGCGAAGCATAGAGGAGG
AGCAGGAGCTTCTGACAAGTTCTCTGCTGGCTTTGACCTCCCACTTTGCT
CACGTCCAGCTTAGAGTCCGCCAAATCGTGGAGGCGCCAGCGGAGGAGCG
GGATCAACTTTTACGCGACCTCGAGGACTTCGCCTTCCAAGGAATTCCAG
ACGCAGTCCAGTCCAAGGAATCCCATCCAGATAAGCCCGCAAGCGATGGT
GAAAAGGACCATGGTCCTGATAGCCAGCTCATCCAACAACTGAAGTCCCA
GCTGACTGAGCTGGAACAAATAGCCTACGAGGCTGGCGAACCTGGCATCC
TGCCGCAGCACGTATTGCTCGAGAAGCAAAAGTTTATCCTGGACGAGCTG
CGCGCCAAGCTCAATCTCCAGGTAGAGCAGCACGAACTGCCGGCCCTTAG
CACGGAACAACTGCGCCACCAGGTCGACAATGCCATCGGCGAGTTTGTGG
GCCCTCTGAAGATGAAGGAGCAACTGGTGGCCCAACTGAAGACGCAGATA
ACTGACTTGGAGCGCTTCATTGCCTTCCTTCAGTGCGATGCCATTGAGGG
ATCCGTTGGGGATCGACTGAAGCTTCTATCCGGTGCGTACACAGCTACGC
TGCAAAGCAGACAGCACGGAGTTCACAAGGCAAGTTACGTTGCCACAAAC
GCTCCAGCTACGACAGCTACTACCCCGCCATCCTCGGGATTGGGTGCCCA
TTCTTCGGCGAGAGCTTGCACAGCAAGGCACATGGCCTTGCTGGACAAGG
CTTCGTCTTCATGCAAATGTTTCGCAGCCCGCATCTTGTGAACACGACTA
CGACGATTTCCAGCTAATTCCCTGAAAAAACCCAAGGGCAACCCCTGGGG
ATTCCTTCAGCTGGAGGTGACTCCAGA
FMO06252.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3703-RA | 2496 | CG3703-RA | 228..1378 | 9..1150 | 5285 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 944462..945546 | 1092..9 | 5095 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:10:46 has no hits.
FMO06252.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:03 Download gff for
FMO06252.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3703-RA | 219..1291 | 1..1071 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:05:12 Download gff for
FMO06252.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3703-RA | 218..1290 | 1..1071 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:41 Download gff for
FMO06252.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3703-RA | 219..1291 | 1..1071 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:41 Download gff for
FMO06252.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 944483..945555 | 1..1071 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:03 Download gff for
FMO06252.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 838516..839588 | 1..1071 | 99 | | Minus |