FMO06253.5prime Sequence
1173 bp (1009 high quality bases) assembled on 2008-09-15
> FMO06253.5prime
CAGTCGACATGAGCCAAAGAGCTGACAGCGGTCACACGAATAGTGGCTTC
AATGGTGGATCCGAGGTGTCCTTGGACATACCCACCAACACGCTGTACCA
CACCTCGCGCGACTGCATTGTGCAGGAGGAGCAGGGTCCCGATGAGAGCT
GCCTGGAGGGAACTCAAAGCTGTTGCTCAAACCTCTGGTCCAACATCTTC
AGGAAGAAAACGCTGTACAAGCGATTCCCCATCCTGGTGTGGCTGCCCCA
GTACAAAAAGGATTATATTTTCGGTGACATAGTGGCGGGCATTTCGGTGG
CCCTGACGGTGATACCCCAGGCCCTGGCCTATGCCGGAATAGCAGGACTG
GATCTGCAGTACGGCCTGTACGCCTGCTTCCTGGGCTGCTTCATATACAT
ATTTATTGGGTCCAGTAAGGATGTGCCTATTGGACCTACGGCCATATCAG
CACTGCTGTCCTTTCAAATCGCTGGAGGCAGTTGGCAGATAGCCACCTTG
CTAACCTTCCTCACAGGTCTCATTGAGATCCTGATGGGAGTTTTCCGGCT
GGGATTTCTCATCGATTTCGTTTCTGGTCCCGTGGGAGCGGGATTCACGA
GTGCCGTGTCCTTGATCATCTTCAGCTCCCAGATGAAGGACTTCTTGGGC
ATCAAAACAAGTGGCAACACCTTTCCTGCAAGTGTGGATTAGCATTGTGA
ACGATATACACAACATCAGCTGGCCGGACTTCATCTTGGGAATCGTCTGC
ATTACTCTGCTCCTGAGCCTGAGAGCCCTGGCCAGTTGTACCCTGGGTCC
CAAAGGAGGGAAAAACCACAGCGCAAAAGCTTCTGACCGGCATTTTTCTT
GGACATCGGAACTGCCCGCAATGCCCTGCTGGTCTGTGAAACTGCTGGCC
TGGGGTTCTGGTTTGTTTTGTCACGGCAAGGAGATCTCGTGAAGACAGTT
GGCTTTGTGCCCAAGGGATTGCCCTCCTTTCAGCCACCACCCTTCCACTG
GATGCCGTTGTCCACGAAACCACAAGAGAAGTCCTTCAGAGCCCAATAGC
TTTCTTGGACATGTCAGCACCCTGGGATCTTGGTCATTGGTGTTTCATGA
ATGCCTCTTCTGGAACTATATGGCCGTGGTTCAGCCTTCCCTAATGCAAT
CCACAGATGCCCGCAGACTTGAA
FMO06253.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:05:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9717-RA | 2679 | CG9717-RA | 235..1395 | 9..1166 | 5010 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:05:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 30585940..30587068 | 1138..9 | 4705 | 96.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:05:40 has no hits.
FMO06253.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:12 Download gff for
FMO06253.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9717-RA | 227..1321 | 1..1096 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:05:14 Download gff for
FMO06253.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9717-RA | 224..1318 | 1..1096 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:17 Download gff for
FMO06253.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9717-RA | 227..1321 | 1..1096 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:17 Download gff for
FMO06253.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 30585998..30587074 | 1..1080 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:12 Download gff for
FMO06253.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26411720..26412796 | 1..1080 | 97 | | Minus |