FMO06270.5prime Sequence
468 bp (468 high quality bases) assembled on 2008-09-15
> FMO06270.5prime
CAGTTCGACATGTACAGGACTTTTGTTTGGCTGTTAACCCTAATGGCAGT
GGCAAGTGCCGCCACCTCGGGTCGGGACTACTTGCCGCGCCCCCCCGCCA
AAGCCTATGTCTACGGCACGCCCCCGCCCAGCACGATGGCTCAGTTGCGA
CGGATAATCCAAGGTCACCTGGAGCGCTTCCAGCTGGCGGAGCAGGCCCA
CTTTTCCCGCCGCGCCAATGTGCAGCTGGGGAAATCGGAAGTGCCGGCGG
ACAGAAAACCGCTGGCGATGCAATTGTGGGTGGTTCGCACGCCCGCCATT
TCCGGCGCGGCCTCGGATAACGTCCTCGATTACGCCCTGCCGCCCAACAC
GCCCACTCCGAAGGACTACGCGCACAAGTTCCTGCCCGAGGGCAAGGATG
TGGTACCCGGAAGCTCTTACATACCGCTGCGGTTGCTGGTGATAAAGCGC
GCAAGCTTTCTAGACCAT
FMO06270.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15554-RA | 801 | CG15554-RA | 89..536 | 10..457 | 2210 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 31126643..31127070 | 30..457 | 2110 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:16:20 has no hits.
FMO06270.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:27:26 Download gff for
FMO06270.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15554-RA | 83..538 | 7..462 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:05:21 Download gff for
FMO06270.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15554-RA | 83..538 | 7..462 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:06 Download gff for
FMO06270.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15554-RA | 85..540 | 7..462 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:06 Download gff for
FMO06270.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 31126233..31126257 | 7..30 | 96 | -> | Plus |
3R | 31126644..31127074 | 31..462 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:27:26 Download gff for
FMO06270.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 26951955..26951979 | 7..30 | 96 | -> | Plus |
arm_3R | 26952366..26952796 | 31..462 | 98 | | Plus |