FMO06277.5prime Sequence
1141 bp (906 high quality bases) assembled on 2008-09-15
> FMO06277.5prime
CAGTTCGACATGTCAACAAGAGGTGGCTTCTTTCGGCTCACAATTCTGGT
GACGGTGGCCGTCTTGGCGATCTTCGTCCTCCTAAGTGCTCTCCAGCGCA
CGGATCATCTCAAACCCACTCCCTTGGGCCAATATGGTGTTAGTGTGGAG
GCCGGACTGGCTGCAAAAGTAACTCCCCCACCGATTCGGCACCTGGAGGA
GCCCATAAAAGAGGAACTTGTGCGGCAATTGGAGCAGGAACTGCCAGAGG
TGGACTATGGCTTCTGGTACCACTGGGCCAAACCCATGGGCTACAAGATA
AACAAAACATGTGCTGTATATCCCGATCCCCTGGACCTGCAGCTGCACAA
CATCTACTGGCAGACCTTCGTCAACGCGAACGTGACCTTTCGGCTATACG
CCGCCTACTTGGACAAGCGGAAAGGGCTTAAATTGCCAACGGTAAGGATT
TTGGCCACTGCCAATCAGATCGACAACGAGTTCCCACCAACCCATTGTCA
AATGTGGTTTGAGGGATATCGGCAGCCCATTTTTGTACCCGTGGCGGAGT
TCCTGAGTGTGTGGGTCGAGGCGTGGGGCAATAAGCCGAATCTTAACTAC
CCGCACCTGTTGAGCTGTCCGGTTCCCAGTGAATTGCCGCCGCCTACGGT
GAACTCCTTTCCAAAAACAGTTTCCCTAGTTGCGCGGCATTGCGAAAAGG
CGGGAAATTCGCTGAGGTCAATATGAATCGGAACAGTCACTGCCCGTGGT
GATCCCGCCCTCTCAAAATCCCAAGTCCCAAAATGCCACTATCCAAAGTC
AAAATGAAGCTCTTCAAACTTTGGAGTTTGCCTCAGGGAATCCATTTTCC
CTATGTGGATTTATCAGAGCGCCTTATCGAGTGGTTTGAGCTGCAGCAAT
TTTGGGAGCCTCACGGATTCTACACCTATAAGAACATATGTTCATCCACC
GTGCAGAAGGGTCCTCGACTACTAACACCGCACTGGATACTTGGAGCTGA
AACCTTTGACCCTGCCAATGGATGCCCGACTGAGAACTACATACCATGGT
GCTGCACCCACAGAAACTATAGAAAGGACATAACGAACCTGACCCCCTAT
ACGAATGCTTCTACCAGCATCTGTAACGGCACAACTATCTG
FMO06277.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:56:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11384-RA | 2159 | CG11384-RA | 25..1164 | 10..1141 | 4840 | 95.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:56:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1175004..1176011 | 1014..10 | 4445 | 97.6 | Minus |
Blast to na_te.dros performed 2014-11-28 21:56:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmir\worf | 4174 | Dmir\worf WORF 4174bp Derived from AY144572. | 791..853 | 255..194 | 123 | 68.3 | Minus |
FMO06277.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:11 Download gff for
FMO06277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11384-RA | 25..1064 | 10..1046 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:52:35 Download gff for
FMO06277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11384-RA | 12..1051 | 10..1046 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:10 Download gff for
FMO06277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11384-RA | 25..1064 | 10..1046 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:10 Download gff for
FMO06277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1174972..1176011 | 10..1046 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:11 Download gff for
FMO06277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1069005..1070044 | 10..1046 | 97 | | Minus |
