FMO06283.5prime Sequence
1133 bp (1032 high quality bases) assembled on 2008-09-15
> FMO06283.5prime
CAGTCGACATGAATTTCAACTGGTGTGCTGGGCTCTTTGTGGTCTTGGCC
TTGGTTTCGCCGATTTATTCCGCCTGCCCAAAGGAAAATCAAATGTGCTT
GAGAAACGGAACGTTTCAGTACTGTGATGGAGAGGAACGTAATTCATCGG
ACGAACTTATGCAAACACATCTGGTTTACTGTACGTCCATGTTCTGCGAG
CCGGAGGAGTTTCAGCACGACTACATAACGCGTAACCACGATCAAACACC
TCACCAGAACAAGTGGAAACGGGCTAGAATCGGCGAACGTGCCACCCTGC
ACGATGTTTGCCTTCTGCGAAACGGAATGCCGGTCACCAGGGAGTGCAGA
GTGAAGGACAACCGAGCCAACTGGGAGTCCACCGAACACTGGGATCCCGT
GGTGTGTTTGAGGCGATTCAGGGAGCACACGATCAGCGGTGACTTGAATA
GCCTGCATGACGACGTTCTCGAGGGCAGGAGGCGCACCAATGACACCCAG
GGGCGTCGTGAGATGACTGGCATAATGAGGAACATGTTCCGACAGAGAGG
TGGGAATCTTCTACCCGCCGATGTTCACATGACCGGACAAATGTTCGGCG
CCCTGATGCAGCAGGACAAGGATGCCACGGTCAGTGTGGACTTGGTCAGT
GTCTGCAAGGAGATAATGTCCTGCGACAGTAAGGTTCTTAGATTATCAGC
TCAGCTCAACGCTACCAATTCCCTGCTCAGCCAGTTCGAAAGCTACATGG
ATGCTCTTCCGGAGCAACTGGTTCCCAAGGACAGATGCGGCAAGGTGGTG
GCCAAGCCGACCAGTGATGAAGCAGAAACGGCCACTACTGGAGTGGAAAC
GTACAACTTCTCAGAATATCGGTGTCCAAGCTCTGATTACCGGCAATATC
AGCGTGTTCTTCGCCAACCCCGAATGCGATCGCATACTGGATTAGCTATA
TTCTCTGCGCAGGGGATCAACGAAGACTTCGCAGTGCTTCTGGTACCGCT
TCATTCGATTCTCGAAGAACTTGGCTAGGTAAGAAGATCTATCTGGAAAC
GCTGCATTTTTGCCGAAATCTCTGCGCAGTGAAGGCAGGGAACAACCTAT
CTCATCTTAAGTTATGCCAAGATCCTGTTCTGG
FMO06283.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:56:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11318-RA | 2764 | CG11318-RA | 108..1230 | 4..1108 | 5010 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:56:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31108056..31109084 | 1027..4 | 4745 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:56:35 has no hits.
FMO06283.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:27 Download gff for
FMO06283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11318-RA | 106..1249 | 1..1123 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:53:06 Download gff for
FMO06283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11318-RA | 103..1246 | 1..1123 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:22 Download gff for
FMO06283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11318-RA | 106..1249 | 1..1123 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:22 Download gff for
FMO06283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31107943..31109086 | 1..1123 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:27 Download gff for
FMO06283.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26933665..26934808 | 1..1123 | 97 | | Minus |
