FMO06287.5prime Sequence
1082 bp (977 high quality bases) assembled on 2008-09-15
> FMO06287.5prime
CAGTCGGACATGGACAGGAGTCGGAGTAGCAGAGCTGCCAGCAGCAACCA
GTTCATCAGGCCATGTGGCCTACTGACGACCGTCATCCTGCTGCAGACGC
TTGTGTCGATGAGTTTGGCCATCGAGGAGATGTCGCCACCACCGGCCGCC
CCGCCACGTCCATCGCCGCCGCCCACCGTGAAGCTCAACAAGTGCTGCCA
TTCGGGCGAGTATCTGAACGATGGCACCTGCATCGCCGGCAGCGAAGCCC
TGTGGCTGCCCATGGTGTACTTGGTGCAGCAGCAGCGCTTCTTCGAGCCC
CATGGCGCCAGTCCGCGATTCTTGAAGTTCCTGCCCAATACGAGACCCAC
GTGCCGAAAGGACCAGACGACGGAGATCTTTCGCAGCCGCGGAGCCAATG
TGATGCTCTTTCCCAATGGCACGCTCTATGTGCGGGAACGCGCTCTAATG
GTCCAGCCGTCGGATTACTGTGTCGACTGGGAGGTGGCCGTCGTTTGCTT
GAACGACAGTCAGCCGATCAATGCTCTGGAGGATCCCGATTATGCAGCCA
ATCCTCTCGTGCAGCAGGAGCCGCCCAAGGCTAGCCTGCGACTGAGCAAG
TGCTGCGGCAAGTGGGGCAGCTATAACACGCAGCTCCAGAACTGCGATCT
GCAGCCCAACCATCAGGCAGCCGTCGATGGACTGCTGCGATTGTCGCCCG
CAGCTACCGGAGGGCAGCTATCAGACTAGCTACGGCCTGCCCGACTGTGG
GCAACCCGGTGGCTACTCCATTGCCCGGTGATTGGCAGGATGCCAAGCTG
GATCGGAACACGGCCATGCTCCAGTTGCCGCACAAGAACCTCAGCGCCGG
AACAATACTGCCTGGAGCACACGCAGCGCGAGGGCGAGGTGAAAATCATA
AGCCTGCCAGCATTTGTTTAGCTCCGCGGCAGGACCGGCATCCACGACGG
CTCCATTGGAGGCACCATCGAGCAGGCATGCCAGATCTGCAGAAGCCGTC
TGACTGTGGCATACTGTGTCCATTGTCTTCCTGTCCGCCATTTGGTGCAG
CTCCTGCTGGCCGCGTGCCTCATGCCCTTCAT
FMO06287.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:09:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mthl1-RB | 5083 | CG4521-RB | 510..1592 | 10..1082 | 4915 | 97.8 | Plus |
| mthl1-RA | 4471 | CG4521-RA | 510..1592 | 10..1082 | 4915 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:09:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16641477..16642441 | 10..977 | 4565 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:09:28 has no hits.
FMO06287.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:22 Download gff for
FMO06287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mthl1-RA | 502..1568 | 2..1059 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:21:34 Download gff for
FMO06287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mthl1-RA | 565..1631 | 2..1059 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:26 Download gff for
FMO06287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mthl1-RA | 502..1568 | 2..1059 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:26 Download gff for
FMO06287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16641469..16642524 | 2..1050 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:22 Download gff for
FMO06287.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16535502..16536557 | 2..1050 | 97 | -> | Plus |
