FMO06289.5prime Sequence
416 bp (413 high quality bases) assembled on 2008-09-15
> FMO06289.5prime
CACCAGAGGAGCCACCTGTAGCGCCACTCGTCCGGGCGGCCGCTCTGCGA
GGTCATGGGCGCGAGCGGTTCGAGGCGTATAGCGACAGTGAGAACGAGAT
AGCCCGACCCGCCACCCAGTCGCCGTACGAACAAATAATCCAACTGGATC
TTCAGAAACAGAAGGTGGGACTCGGCGAACAGGGCGTGGCAGTGCATCTT
TCCGGTGCCGCCAAGGAACGAGGCGATGAGATCTACAAGAAGATTGCCCT
CAACGAGGAGCTAAGCGAGCAGTTGACCTACAACCGGAGTGTCGGTGACC
ACCGGAATCCCCTGTGCGCCAAACAGCGCTTTGATTCCGACTCCCTGCCC
ACCGCCAGTGTGGTCATCATCTTCTTCAACGAACCCTACTCCGTGCTGCT
GAGGACCGTGCACAGC
FMO06289.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:59:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GalNAc-T1-RB | 2677 | CG8182-RB | 390..805 | 1..416 | 2080 | 100 | Plus |
| GalNAc-T1-RA | 2697 | CG8182-RA | 410..825 | 1..416 | 2080 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:59:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15512201..15512616 | 1..416 | 2080 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:59:15 has no hits.
FMO06289.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:03 Download gff for
FMO06289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GalNAc-T1-RA | 410..825 | 1..416 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:52:55 Download gff for
FMO06289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GalNAc-T1-RB | 460..875 | 1..416 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:46:35 Download gff for
FMO06289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GalNAc-T1-RA | 410..825 | 1..416 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:46:35 Download gff for
FMO06289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15512201..15512616 | 1..416 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:03 Download gff for
FMO06289.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11399706..11400121 | 1..416 | 100 | | Plus |
