FMO06291.5prime Sequence
323 bp (323 high quality bases) assembled on 2008-09-15
> FMO06291.5prime
CAGTCGACATGAAATTCCTGATCATTGCCATCGCCTTCTTGGCCTGCGCA
TTCGCCGATGTCTCGGAGCTTTCTGGCTACGACTACCAGCAGCCAGCTCC
TGCTCCCGTGGAAACCTACATCCCACCTGCACCGCCAGCACCTGCTCCCG
TCGAGACCTACATCCCACCTGCACCACCAGCACCCGAGTACATCCCACCT
GCTCCTGTCCAGGCCGAGGAACCCATCATCGAGGAGATCGAGCAGCCCGC
CCAGGACGGCTACCGCTACAAGACCGTCCGCCGCCACGTCTTCCGTCACC
GCAACGCAAGCTTTCTAGACCAT
FMO06291.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17290-RC | 2443 | CG17290-RC | 153..450 | 8..305 | 1490 | 100 | Plus |
| CG17290-RA | 440 | CG17290-RA | 45..342 | 8..305 | 1490 | 100 | Plus |
| CG30458-RA | 614 | CG30458-RA | 300..491 | 114..305 | 660 | 89.6 | Plus |
| CG17290-RC | 2443 | CG17290-RC | 279..329 | 92..142 | 195 | 92.2 | Plus |
| CG17290-RC | 2443 | CG17290-RC | 237..287 | 134..184 | 195 | 92.2 | Plus |
| CG17290-RA | 440 | CG17290-RA | 129..179 | 134..184 | 195 | 92.2 | Plus |
| CG17290-RA | 440 | CG17290-RA | 171..221 | 92..142 | 195 | 92.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17154838..17155132 | 11..305 | 1475 | 100 | Plus |
| 2R | 25286936 | 2R | 17158448..17158639 | 305..114 | 660 | 89.6 | Minus |
| 2R | 25286936 | 2R | 17154919..17154969 | 134..184 | 195 | 92.2 | Plus |
| 2R | 25286936 | 2R | 17154961..17155011 | 92..142 | 195 | 92.2 | Plus |
| 2R | 25286936 | 2R | 17158822..17158880 | 69..11 | 190 | 88.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:09:22 has no hits.
FMO06291.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:47 Download gff for
FMO06291.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17290-RA | 45..346 | 8..310 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:52:58 Download gff for
FMO06291.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17290-RA | 43..344 | 8..310 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:31 Download gff for
FMO06291.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17290-RA | 45..346 | 8..310 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:31 Download gff for
FMO06291.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17154836..17155136 | 8..310 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:47 Download gff for
FMO06291.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13042341..13042641 | 8..310 | 99 | | Plus |
