FMO06296.5prime Sequence
1112 bp (957 high quality bases) assembled on 2008-09-15
> FMO06296.5prime
CAGTCGACATGTACGACATCAAGCGCCTGGAAGCGGGACAACAGAAACTA
CAGCAAGCACAGCAACCACTGGGCCTTGACCTGAGCGGCCAGCAACAGCA
ACTCACCTGCAGCGTGATCACAGCGCCCGAGCATCGGGCTAATCCCAATC
CCAGCTCCATTTCGCAATCCAACCCCAGCGAGGCCACCCACATGACTTTG
TTGACGCTGCGCCGGCGCCGTTCGCTGCAGCGACGCGCCTGCCTTCTGAG
CATCCTCGCCGCCTTCGTCTTTGGCATGGCACTGGGCGTTGTTGTGCCCA
TGTTCGGCCTGCCCCGCCACCAGGACTCCCCGCCAGATCTGCCGGAGGAG
CAGATACAGATGGTTGCCGTGGAGCCGCTGAGCAGCTACCGCGTGGAGTT
CATCAAGGAGACGGACGAGCTGAGTGCCGAGCAGGTATTCCGCAATGCCT
TCCATCTGGAGCAGGACAAGGATGCTCCGGACTCGATGGTGGTGAAGAAA
TTGGACACCAACGACGGCAGCATCAAGGAATTCCATGTGCAGCGCACCGC
CAGCGGTCGTTATCGCAAGGGTCCGGAGAGGAGGCTGTCCAAGAAGATGC
CGGAAAGGGTGCAGCCACAAGAGACCTCTCGTTCTCCGACGACCTCGCCG
ACAAATCCTACCAGTGAGCACCAAGCGGGATTTATTGAGGAGGACGTCTA
TTGGGGTCCCACTGTGGAGCAAGCTCTGCCCAAGGGATTCGCCGCCAAGG
ACCAAGTCTCTTGGGAACGCTTCGTTGGAGAGCAGGCCGAGTAGTTCGCC
TGTGGCAGGGATGCGGAAAATGCAAAATCGCATGGTGGTCTTTGCGGATG
GAACAAGGGCCTGTGCCCGCTACCGCCAGAATACGGATCAGATTCAGGCG
AAGATATTCAGCTACTACTTGGGCCAGCTCTTAACATAAGCAATCTGGCC
CGAGTGCCGCACCGTGGTGACCACCAGCACGCCCAATTGGGCCCGCTGCC
CTGGGCGACATAACCAGGCGCATTGAAGAACCGCCGACAATGATGCTGAC
CCGCTGCTGTTCGATCTGGAGCCGCTGGATACCACAGCCCTTTCCGCCGC
TGGGAAGCGCAT
FMO06296.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fj-RA | 3551 | CG10917-RA | 1350..2454 | 9..1103 | 4990 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18234110..18235214 | 9..1103 | 4695 | 97.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:08:45 has no hits.
FMO06296.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:27 Download gff for
FMO06296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fj-RA | 1342..2462 | 1..1112 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:52:44 Download gff for
FMO06296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fj-RA | 1340..2460 | 1..1112 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:16 Download gff for
FMO06296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fj-RA | 1342..2462 | 1..1112 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:16 Download gff for
FMO06296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18234102..18235222 | 1..1112 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:27 Download gff for
FMO06296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14121607..14122727 | 1..1112 | 96 | | Plus |
