FMO06302.5prime Sequence
890 bp (889 high quality bases) assembled on 2008-09-15
> FMO06302.5prime
CGTTATCAGTCGACATGTTGGGCAACAGTTGGCCCGGTTGCAAGCGGGCT
CCTCGCATGGTGCTCAAACATGTGAGGCGGCAGCACGAGGAGTTGCGGGA
GCAGCTGGAGCAGGGATGCGACGATCTCATGGAGGTGGCCGAGTCTTATT
TTCCGGATGTCTTGCAGCATTTCCAGCGCAACTCGAAACTGGCTGAGTCA
TCGAAGCGATTGAAGTCACAGATCTGGAGCTCAGTGGTTACCATATTGCT
GGTTAAAGCCAAGGATTTGCCCTTAGCTGAAGATGGCAGCAAGCTGAATG
ATACTCACTTCAAATTCAGATTGGGCAATGAGAAGTACAAGAGCAAGTCT
TCCTGGACGGAACGCTGGCTGGAGCAGTTCGACTTGCACCTGTTTGATGA
AGATCAAAACCTGGAGATCGCACTTTGGAACCGGAACACCCTCTATGGCA
AAGCCATTATTGACCTCAGCGTTTTTCAGCGCGAAAACACGCATGGCATT
TGGAAACCTCTGGAAGATTGCCCTGGTGAGGTCCACCTTATGCTCACTAT
AAGTGGAACCACTGCCTTGGAGACGATCAGCGATCTGAAGGCCTTCAAGG
AGGATCCTCGAGAGGCTCAATTGCTAAGGGAAAGATATAAATTCCTAAGA
TGCCTCCAAAACCTCCGCGATGTGGGTCACCTAACTGTAAAGGTCTTTGG
AGCCACTGGACTGGCTGCAGCGGATATAGGTGGAAAATCCGATCCTTTTT
TGTGTATTGGAACTGGGTAACGCCCGACTGCAAACCCAAACTGAGTATAA
AACACTCACTCCTAATTGGAATAAGATATTTACTTTCAATGTTAAAGACT
CACGCAGGTCCTGGAGATCACCGTTTTCGATGAGGATCGC
FMO06302.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:06:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mctp-RB | 2824 | CG15078-RB | 109..985 | 14..890 | 4340 | 99.8 | Plus |
Mctp-RG | 4123 | CG15078-RG | 1561..2284 | 167..890 | 3575 | 99.7 | Plus |
Mctp-RF | 4223 | CG15078-RF | 1504..2227 | 167..890 | 3575 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:06:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18771950..18772470 | 315..836 | 2560 | 99.8 | Plus |
2R | 25286936 | 2R | 18771586..18771891 | 14..319 | 1530 | 100 | Plus |
2R | 25286936 | 2R | 18772539..18772593 | 837..890 | 225 | 98.2 | Plus |
Blast to na_te.dros performed 2014-11-28 21:06:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gtwin | 7411 | gtwin GTWIN 7411bp | 1756..1796 | 244..284 | 115 | 75.6 | Plus |
FMO06302.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:54:59 Download gff for
FMO06302.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mctp-RB | 109..985 | 14..890 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:00:00 Download gff for
FMO06302.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mctp-RB | 98..974 | 14..890 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:41:55 Download gff for
FMO06302.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mctp-RB | 109..985 | 14..890 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:41:55 Download gff for
FMO06302.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18771586..18771891 | 14..319 | 100 | -> | Plus |
2R | 18771955..18772470 | 320..836 | 99 | -> | Plus |
2R | 18772539..18772593 | 837..890 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:54:59 Download gff for
FMO06302.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14659460..14659975 | 320..836 | 99 | -> | Plus |
arm_2R | 14659091..14659396 | 14..319 | 100 | -> | Plus |
arm_2R | 14660044..14660098 | 837..890 | 98 | | Plus |