FMO06303.5prime Sequence
1044 bp (966 high quality bases) assembled on 2008-09-15
> FMO06303.5prime
CAGTCGACATGGAACGGCCACACATTGGCTTGTTTACCTATAAAATCTGT
AATGCATTGAAAGAACTAACGGAAAGGATGATTCGCTTACGGCAAGCAAT
TTGTGAGCAGCTGCCGCATCTCAAGAATGCCTGCTATGCCCTGGAGGTGC
CTGTCAAGAAACAACAGCTACAGAATAGCCGACGTCCAACTGTGGAGTGG
ATTCTGCCCTCTGCGTTTGCGCAACAGGAGGTGGAACTACTGGACTCATT
GAAGAAGCGCAGATTCGAGGCCTATGTGGAAAACGTTCGGATTGTACCTA
GCGCTGGGCGCAGTGCAGCCAAAATCGAGTTTCAGCTGCAGCCACAGGTC
TTTGTAGAACAGCTCCTCCAAACTAAAGAGATTGCTTTACATCCTTCGCC
CTTTGCTGCGGAACACATAGTGGTTGAGTACAGCTCGCCCAACATAGCCA
AACCCTTCCACGTGGGCCACCTGCGCTCCACAATCATCGGCAATGTTCTG
GCCAACCTGCATGAGCATTTGGGCTACCGCACAACACGGTTGAACTATCT
GGGGGATTGGGGCACGCAATTTGGACTACTGGTATTGGGAGTTCAACTGC
TGAATGTAAGCGACAAAGAGATGCAACTATCCCCAATAGAAAACGCTGTA
CAAATCCTACGTGGCCGCCAACAAGGCTGCTGAACAAAGACCCTGAAATC
GCGCAACAGGCGAGGGACCTCTTCGCCGCCTTGGAAGGAGGAACGGATAA
ATCAATGGCCAAGAAATGGCAGCAATACAGAAACTACACTATAGAGGATC
TATCCAAAGTCTATAACAGATTGGGGCGTTCACCTCGATGGCTACGAATG
GGAATCCCAGTACTCCCGCAGCAAATCAGGATGTTCTGGACAACTGCGAA
GCGCTGGATCCTCCAGCCGGAGCACGATGGTCGTGAAGATTGTCTGGTGG
ACGGCCGACCATTCCTGTGATCAGAGTAATGGATCCACTTGTACTGGCCA
GGGACATAGCTTGCCTGCTGGAAGAGATTCTCCAGTTCCGTTTC
FMO06303.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10092-RB | 2748 | CG10092-RB | 62..1093 | 8..1035 | 4760 | 98.2 | Plus |
| CG10092-RA | 1934 | CG10092-RA | 62..1093 | 8..1035 | 4760 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7887337..7888256 | 108..1022 | 3910 | 98.2 | Plus |
| 3R | 32079331 | 3R | 7887208..7887277 | 41..110 | 350 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:13:51 has no hits.
FMO06303.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:07 Download gff for
FMO06303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10092-RA | 57..1103 | 1..1044 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:00:02 Download gff for
FMO06303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10092-RA | 18..1064 | 1..1044 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:41 Download gff for
FMO06303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10092-RA | 57..1103 | 1..1044 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:41 Download gff for
FMO06303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7887208..7887277 | 41..110 | 100 | -> | Plus |
| 3R | 7887340..7888278 | 111..1044 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:07 Download gff for
FMO06303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3712930..3712999 | 41..110 | 100 | -> | Plus |
| arm_3R | 3713062..3714000 | 111..1044 | 97 | | Plus |
