FMO06307.5prime Sequence
407 bp (368 high quality bases) assembled on 2008-09-15
> FMO06307.5prime
CCCTTATACCACGTTATCAGTCGACATGTGGCCACCCAGCTCCTGTCTGT
GGTTGGCTCTCGCCCTCCTGGTGGGCGTGGCCCAGGCCCAGAGCGGCAGT
CGAGAGCACTTCGAGGATGCGGACAAGTCCAGCGAGTATACGGATCAGCA
GTTCGATCTACGGCACACGATTCCCGGAGAACCGGGCCTAGACTATCCCA
TTCTAAGTTCGCCGCCAAGGACCAGCTTTGTGTGCAAGGGAAGACATGAA
GGTTATTACGCGGATGTAGAAAGTCGCTGCCAGGCCTTCCGCATTTGTGC
CCATACCGCCCGATCACCCCAAGGATTCGGTTTCCTCTGCCCCAACGGAA
CGCTCTTCAGCCAGAAGAACTTTTTGTGCGATTGGTACCGCAATGTGAAC
TGCGATG
FMO06307.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:01:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5756-RC | 4100 | CG5756-RC | 247..629 | 25..407 | 1900 | 99.7 | Plus |
| CG5756-RB | 2666 | CG5756-RB | 247..629 | 25..407 | 1900 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:01:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18105082..18105310 | 253..25 | 1145 | 100 | Minus |
| 2R | 25286936 | 2R | 18104783..18104940 | 407..250 | 775 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:01:07 has no hits.
FMO06307.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:12 Download gff for
FMO06307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5756-RB | 247..629 | 25..407 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:00:10 Download gff for
FMO06307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5756-RA | 244..626 | 25..407 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:32 Download gff for
FMO06307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5756-RB | 247..629 | 25..407 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:32 Download gff for
FMO06307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18105084..18105317 | 17..251 | 98 | | Minus |
| 2R | 18104783..18104938 | 252..407 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:12 Download gff for
FMO06307.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13992288..13992443 | 252..407 | 99 | <- | Minus |
| arm_2R | 13992589..13992822 | 17..251 | 98 | | Minus |
