FMO06310.5prime Sequence
546 bp (546 high quality bases) assembled on 2008-09-15
> FMO06310.5prime
CAGTCGACATGAAACCCTTTGCCTGCATCCTGGTGATCCTTGCCGCCATC
CTGTCCGTGGGACAGGCCTCCCTGGGCGGTCTTCTTGGCGGCGGCGGTGG
AGGCGGCGGCTCTATTGGCGGAGGCGCTGGCGGCATCGGACAGCTGCTGC
AGAGCAAGCTGGGCGGTCTCGGCGGAGGATTGGGCGGCGGCCTGGGCGGT
CTGAGCGGTGGTCTTGGCGGCAAGCTCGGCGGCGGTGGAGGCGGCGGCGG
CTACTCCGGTGGCTACTCCAACGGTGGCGGCTACTCCGGCGGTGGTGGAT
ACTCCGGCGGTGGTGGATACTCCGGCGGCGGTGGCTACTCTGGCGGATAT
GCTGCTCCCAGGCCCGTTGAGAAGGTTGTCATCGTGAAGGTCATTAACGA
AGGCTACTCTGGCGGTTACTCCGGCGCTCAGTCTGGTGGCTACTCCGGTG
GTTACTCCGGCGCTCAGTCTGGTGGCTACTCTGGTGGCTATTCCGGCGCT
CAGTCCGCCGGCTGGAACAAGGGCTGGGCCAAGCTTTCTAGACCAT
FMO06310.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10598-RC | 1711 | CG10598-RC | 475..998 | 4..527 | 2605 | 99.8 | Plus |
| CG10598-RA | 729 | CG10598-RA | 50..573 | 4..527 | 2605 | 99.8 | Plus |
| CG10598-RC | 1711 | CG10598-RC | 873..940 | 438..505 | 265 | 92.6 | Plus |
| CG10598-RC | 1711 | CG10598-RC | 909..976 | 402..469 | 265 | 92.6 | Plus |
| CG10598-RA | 729 | CG10598-RA | 448..515 | 438..505 | 265 | 92.6 | Plus |
| CG10598-RA | 729 | CG10598-RA | 484..551 | 402..469 | 265 | 92.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17225870..17226393 | 527..4 | 2605 | 99.8 | Minus |
| X | 23542271 | X | 17225892..17225959 | 469..402 | 265 | 92.6 | Minus |
| X | 23542271 | X | 17225928..17225995 | 505..438 | 265 | 92.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:58:40 has no hits.
FMO06310.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:19 Download gff for
FMO06310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10598-RA | 46..576 | 1..532 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:59:54 Download gff for
FMO06310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10598-RA | 45..575 | 1..532 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:35 Download gff for
FMO06310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10598-RA | 46..576 | 1..532 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:35 Download gff for
FMO06310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17225866..17226394 | 1..532 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:19 Download gff for
FMO06310.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17119899..17120427 | 1..532 | 98 | | Minus |
