FMO06317.5prime Sequence
1117 bp (955 high quality bases) assembled on 2008-09-15
> FMO06317.5prime
CAGTCGACATGGTGCGGTTAAGTGCAGCCTGGAGCTGCTGTTTTTTGGCC
CTGATTGCGTTGGTATCCACTGTCGCCTCCTCCGCTGCGGATTATCCGGG
TGTCATCGAACTGGTGGGTTATAGCAATCGCCGCGCACGGACTTACTTCC
AAGAGCAACCCCGCTCCAATCCCAATCCCAAGCCGGGTTTGACTTCGGCC
AAAACCCGGGCGGATATTGAGACCGTGAAGCGGAATATCCGTAAATACGA
TCGTTTGCTAGAGTTGGATACGAAAAATCTGCCAGAGCAGCAAAAGGATA
TGCTCGCCAGGATTGTGGAGCGAGTGGCCAGGCTCAAGGAATCCCTGGAC
ATTGAGGAGCAGCAATTTAACCAGCAGGAAGCTACCTCCTCCAGGAGCAG
TAGTAGTACCACCACTAGTGCATCCAGTACTCAAGAATCGCAAACAGAAG
CGGAAACGGAGCTGGATCAGGAGCCGATCGAGCAGAGCACACAGCTGCCC
ACTGGAGCCACCGAAGCTGAAACGGATCCCACCCTAATCCTAGACGAAAC
TACGCTGCTGGAGCTGCAGAACACGATGAACGAGCAGGCTGCCATGAGCA
CCATAATGAAGGAAATGCCCACGACCACGGATATGAGTCAGCAGGAAGCG
GAATCGGAGGTCCCCGACGAGGAGGGAGAGACCACCTCACCAAATCTGAC
CACCCAATCGGGAGGCAGCGACGACCAGTGATGAATCCCTCACCGATTCC
ACTGATCCCGATGATCAATTCGTAGCTGCCAGATCGAATACAATATAGCG
GCCATAACGGGCAGCGGATGATGCCGATGGCACCACCACAACCACCGCCA
ATACGGGCAGTCAGCAGCGCACGTTGACCACCATGGGAAAACTTAGGATC
GGGCACCCAAGCGACCCTTCGCCCAATAGTCAACGCCGCCCTGAAACGAG
GAGTCACGTTCGAGTACCGGGAGTGCGGCAGCTGCAATGGCGCACAGCCT
CAAAACCAAGTAGAGCACACACGCGCGGCGCAGCAGACCACCAAACAGAA
ATGCCCCATAGTTCCACAAGCACACACGAGCCCTGCAAAGTCAACCTCAT
GGCGGGGTGATACCCAA
FMO06317.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:23:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dsx-c73A-RB | 3496 | CG32159-RB | 346..1361 | 9..1018 | 4630 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:23:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16450634..16451613 | 985..9 | 4425 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:23:54 has no hits.
FMO06317.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:21:40 Download gff for
FMO06317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dsx-c73A-RB | 338..1337 | 1..998 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:00:22 Download gff for
FMO06317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32159-RB | 334..1333 | 1..998 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:10:36 Download gff for
FMO06317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dsx-c73A-RB | 338..1337 | 1..998 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:10:36 Download gff for
FMO06317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16450622..16451619 | 1..998 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:21:40 Download gff for
FMO06317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16443722..16444719 | 1..998 | 97 | | Minus |
