FMO06336.5prime Sequence
761 bp (751 high quality bases) assembled on 2008-09-15
> FMO06336.5prime
CAGTCGACATGATCGCTGTTTTTTCACTCATTGCGGCTGCTCTCGCCGTT
GGATCCCTCGTTCTGCTCCCCGTTGTCCTAAGAGGTGGATGTCTACTTGT
CGTAACAATCGTTTGGCTGTGGCAAATTCTACACTTCTGGCATTGGCGAC
GTCTGGGCGTCCCCTTTGTTCCGGCTGCCCCATTTGTGGGGAATGTGTGG
AATCTTTTGCGTGGAGCCTGCTGCTTTGGCGATCAGTTTCGCGAGTTGTA
CGAGAGTAAGGAGGCTGCCGGCCGCGCCTTCGTGGGAATTGACGTGCTGC
ACAATCACGCACTGCTTCTTCGAGATCCGGCTCTGATCAAGCGCATTATG
GTGGAAGACTTCGCTCAGTTCTCGAGCCGCTTTGAGACGACAGATCCCAC
TTGTGACACAATGGGATCGCAGAACCTTTTCTTTTCCAAATACGAGACTT
GGCGGGAGACGCACAAGATCTTTGCGCCCTTCTTTGCTGCGGGAAAGGTG
CGCAATATGTACGGGCTTCTGGAAAACATTGGACAGAAGCTCGAGGAGCA
CATGGAGCAAAAAGCTAAGCGGCAGGGATAGCATGGAACTGGAGGTCAAG
CAGTTGTGTGCCCTCTTCACAACGGACATCATTGCATCCCTGGCCTTTGG
CATAGAGGCGCACAGTCTGCAAAATCCCGAGGCAGAGTTTTCGTCGTATG
TGCATTGAGGTCAATGACCCCAGCCAAAACGCCTCCCTACACCTCCTTCA
CCATGTTCTTC
FMO06336.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:44:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6t1-RA | 1785 | CG1644-RA | 81..830 | 9..761 | 3630 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:44:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21518389..21519138 | 761..9 | 3510 | 98.7 | Minus |
| 2L | 23513712 | 2L | 21283834..21284098 | 475..211 | 575 | 81.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:44:38 has no hits.
FMO06336.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:41 Download gff for
FMO06336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6t1-RA | 23..781 | 1..761 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:00:29 Download gff for
FMO06336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6t1-RA | 23..781 | 1..761 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:58 Download gff for
FMO06336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6t1-RA | 72..830 | 1..761 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:58 Download gff for
FMO06336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21518389..21519145 | 1..761 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:41 Download gff for
FMO06336.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21389416..21390172 | 1..761 | 98 | | Minus |
