FMO06345.5prime Sequence
1144 bp (947 high quality bases) assembled on 2008-09-15
> FMO06345.5prime
CAGTCGACATGGGGAACTACGAGAAACTGGATGGCAGTTCCGCGGGGAGG
ATTACGGATGAGCTGTCCCGTAAGGAACAACGGAATTGCAGCCTGCGAAC
TTTGGTCTGCTGGAGTGCTTTGTTGTTCTCTTTGTTGTGCCTTTGCCTCG
GGTTCATCGGCCTGGGATTACTCGGCATCCAAACTGGGGAAGTGCACAAG
GTGGGGCAGCGGTTGGTGTGCTACTACGCAAGCGATGGCACCCACAATCT
CAGCCTTTTGGATGTTCCCGGCGACCTGTGCACCCACATCAATATCGGAC
CCGCCACTTTGGATAATGCCACCATAGTCCTTCCCGATACCCTCAGACAG
GTACTACAGAACGACACCCGATCCTTTCGTGCTGCCCATCCGCAGGTTCA
CCTGCTTCTCTGGATCGGTGGCGCCGACAGTGGGCGGTCATTTGCCCTCA
TGGTGGCGAACCACGCCATGCGAAAGTTGTTCCTGCGCTCCCTCCGGGAA
ATATTGCGCACCTATCCCAGTTTGGATGGCATCGATCTCGACTGGGAGTT
TCCGAGTGCCTACGATCGTGAGCGAATGCATCTCTCGCAGCTGCTTTACG
AGATTAGAACGGAGTGGCGGCGCGAAAAGCGTACCAATGATATTCTCTCG
CTGGCGGTGGCTGCTCCCGAGGGAATCGCCTTCTATGCCTACGACATCCG
AGAGATAAATCTGTACGCAGATTATGTAAATCTAATGTCCTATGATTTCC
ACTTCTACCGCGAGGATACACCATTTACCGGCTTAAATGCTCCGCTTTAT
GCCCGCTCGCAGAACGTTCGCTATGGCCACGTTTCACAATCATATACACG
GTTCAGTGGTGGCTAAAAAGCGGTCTGGAGCCACAGCGACTGGTTGTGGG
GTCTGCCCACCTACGGCCACTCATTACGTTGGTATACCTTTAAATCATAC
GCTAGGAGCTCCTGCTTCGGTAACGTAAATGTGGCAACTGGCTTCCCCAC
CTGACCGAACTTGTGATGGGTCACAGTTCTTCAAGCCAACTTGTCCTACG
ATGCGAACTGTTCGCCTATTTAAACCGCTCTGAGAATGGAATATCGTACG
AAATCAACGATTATGCTGCAAGCAACATATGTGTAATCCTTCAT
FMO06345.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:22:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cht11-RA | 1576 | CG3044-RA | 47..1202 | 9..1143 | 4775 | 95.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:22:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6848555..6849471 | 925..9 | 4335 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:22:19 has no hits.
FMO06345.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:27 Download gff for
FMO06345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cht11-RA | 9..1150 | 1..1122 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:52:08 Download gff for
FMO06345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cht11-RA | 9..1150 | 1..1122 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:57:19 Download gff for
FMO06345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cht11-RA | 39..1180 | 1..1122 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:57:19 Download gff for
FMO06345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6848544..6849479 | 1..936 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:27 Download gff for
FMO06345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6742577..6743512 | 1..936 | 98 | | Minus |
