FMO06351.5prime Sequence
297 bp (-60 high quality bases) assembled on 2008-09-15
> FMO06351.5prime
CGATGGTTGGAAAATCAAGAAAAGCGGAAAAGCCCGGCGACCAGCCCACC
GCCTATAGCATGCGACCGGCCTTTGGGGAGATGTTTCCCCTGCCCTCCAT
CTAGATCATAATGAACAACGTTATGGCCGAGAAACTCAAAGACAAAACCT
ATGACATGGACGTCGCCAAGAAGTGGACCAGTGAGATCGCCGACGAGGTG
AACCAGCAGATAGCCAGCAGCTCCCTGTTGAAGCGGTACAAGCACGTGGT
TCATGTGATGCTAGGCCAGGAGCTGGGTGCGGGGGCCACTTACAACT
FMO06351.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:50:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5359-RC | 1241 | CG5359-RC | 195..493 | 1..297 | 1340 | 97 | Plus |
CG5359-RB | 713 | CG5359-RB | 195..493 | 1..297 | 1340 | 97 | Plus |
CG5359-RA | 1244 | CG5359-RA | 195..493 | 1..297 | 1340 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:50:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10000726..10000884 | 297..139 | 735 | 97.5 | Minus |
3R | 32079331 | 3R | 10000940..10001075 | 141..7 | 585 | 97.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:50:50 has no hits.
FMO06351.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:47:04 Download gff for
FMO06351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5359-RA | 195..493 | 1..297 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:00:47 Download gff for
FMO06351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5359-RA | 194..492 | 1..297 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:34:54 Download gff for
FMO06351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5359-RA | 195..493 | 1..297 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:34:54 Download gff for
FMO06351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10000940..10001082 | 1..141 | 96 | | Minus |
3R | 10000726..10000881 | 142..297 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:47:04 Download gff for
FMO06351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 5826448..5826603 | 142..297 | 97 | <- | Minus |
arm_3R | 5826662..5826804 | 1..141 | 96 | | Minus |