FMO06359.5prime Sequence
995 bp (622 high quality bases) assembled on 2008-09-15
> FMO06359.5prime
CAATCCACATGGCTGTGCTGGGCGCCCAATTGGTCATCACCTTGGTGATG
GTCAGCGTTATCCAGAAGTTGAGTCCACACTACTCCTTCGCCAAGTGGAT
TCTGTGCCGCACCGGACTCTATCGATACCTGCATCCCACGGACGATGAGC
TGCGGTCCCGCGGCGGTGTGCCCAAGGAGAAGCCACCAAAAGGTGGTCGA
AATAAGCAGGCAAATGGTTCAGGAGGAGCGGCGGGTGCACAATTCCACAT
ACCGCGCACCATTGAGGTGGAGCTGTTGACGTCACCGGTGTTGGAACGGG
ATGTTGTCCACCTGCGCTACTTCACCGAATATCAATGGCTGCTGGACTTC
AGTGTCTACACGGGGATCGTCTACGTGGTCTCCGAGCTGTTCCACTTCTA
CTACCCGCTGCGCCACGAGGTCAACTTGAGCATGGTGTGGTGCCTGCTGG
TCATCTTCTTTGCCCTGAAGCTGCTGTCCTCGCTTACGGTGCTCTACTTC
CAGAGCGAGGATTCCATCGGCGAGAGGTCGATGGTGATTGTTGCCTGTTT
GGTTTACCTGCTGGTGGCCATGGTCGTGCTGATCATTGACGAACGCATTC
TGGAGACGGGACTGGAGGATGCCTATGCGAGCTTTATGCCAGCGCTTCCA
AGTTCCTCATCGAGCAGGGCCTGCCATCATCTGGTCCCGCCTCCAAGATC
GTGGTCAAGTTCTTTTTTGCCATGGGTTGCGGCCTGCTCGGCTCATTGTT
CACCTTCCCCGGCTTGCGGATGGGCCAATATGCACTGGGGATCCTTGAAA
TACTGTCCCGGCCACCGGTTGCTGCCAGTGCTCCTGGATTCTCAGCTTTG
AGCTGCCCTTTATTCCTGGGTCCTCCTGTGTATCGGCCCTATAGCCGCAA
TTACCTGGACGGTGGCACTTCTCAAGGAATGCAACAACCACTACTGATGC
CCAACCTTATTTGAAAACACTTCGCCGGCTGATAGGATCTTGGAG
FMO06359.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7638-RA | 1891 | CG7638-RA | 148..1127 | 9..991 | 4165 | 95.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11110029..11110404 | 11..386 | 1865 | 99.7 | Plus |
| 3L | 28110227 | 3L | 11110503..11110800 | 385..681 | 1380 | 98.3 | Plus |
| 3L | 28110227 | 3L | 11110862..11111084 | 682..907 | 665 | 90.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:13:16 has no hits.
FMO06359.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:31:01 Download gff for
FMO06359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7638-RA | 142..1003 | 2..865 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 10:52:16 Download gff for
FMO06359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7638-RA | 140..1001 | 2..865 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:04 Download gff for
FMO06359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7638-RA | 142..1003 | 2..865 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:04 Download gff for
FMO06359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11110862..11111043 | 682..865 | 92 | == | Plus |
| 3L | 11110023..11110404 | 3..386 | 98 | -> | Plus |
| 3L | 11110505..11110800 | 387..681 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:31:01 Download gff for
FMO06359.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11103123..11103504 | 3..386 | 98 | -> | Plus |
| arm_3L | 11103605..11103900 | 387..681 | 98 | -> | Plus |
| arm_3L | 11103962..11104143 | 682..865 | 92 | == | Plus |
