FMO06364.5prime Sequence
1149 bp (992 high quality bases) assembled on 2008-09-15
> FMO06364.5prime
CAGTCGACATGTCCACTTGCAGTTCATCCGAGATAGCGGAGAAGAAGCGC
ATTGCGCTGGCCAAATTGCAGGCCAAGAAATCCCAGCTGCTGGCCAGCGC
ACCCGCAACCAATGGAAAATCAACAACGTCTGCAACAGGTGCGACGCAAC
ATGCGAATAATGGAAAATCAAATCCCAATCAACCGCAGGCCAAATCCCCA
TTGAATTTCTACCGATCACCGACGGGGGAGCAGAAGAAGATCAACAGGAG
CGGTCCCACGCCCGGTGACAACAAGAGCTCATCCTTTCTGAACGCTCTGA
AAGCAATCAAACAGACATCCAACCGGGAATTGTCCCGCGGAGCAGCACAT
CCTTACCAGCGGCCAAATGGAGGGAACGAAAGAAACAAGCCCACTCTTTC
ACTGAGTTCGGATAAGGAGAAACCGGTGGCTGTGCTACTCGGAAACTCCA
TCACGTGTAATCTCTACTTGATCAGCACACATCGGTTTGCTGCCCAAACC
TCAGGATATCACGAACAGCTCGTGACCGTGTTCAAGAACATGCCCACCAA
GTGCTACGATGGCCAGACCCGTATCTGGAGTTTCGATCTGTCGGACTACC
AATCCCTGAAAACTCATGCAGCGGATCTAAAGCCATATGTTCACATGAAT
GGCATTCCGAAGAAGGTGCTGGATCTCTGCGGCCAGCCGCCAGTAGTTCC
GGAAAGAAGTGTTTTAGCTTCCATAGAACCGAAGCTGGCGGACCAGCTAA
TGCCCTTCCAACAGGATGGGGTATGCTTTGCCATAGCCCAAAAGGGACGC
ATTATGATCTGTGATGAAATGGGCCTGGGCAAAACCTATCATGCCTTGGC
CGTAGCCGACTATTTCAAGGATGATTGGCCCTTGCTTGTCTGCACACCGC
TTCTACGAGAGACAGTTGGGCGAAAACATATGGATTCTACTGCCGAAGTG
CCCATCCACTATTTTCCAGGTGCTGAACACAATCAGCTATATGTGGGTTG
AGGCCAAGGTGCTATCCCCAGCTACATTATGATGGACGACACGAAAATAA
GCTGATGCACGGAAGTTGGCTTCTCATCTTCACAATCCCACCGCTGAAAA
AGCCAGCAAGTGCCTAACACGGCCAAAACTCGATCAGCAAGCGGTGATT
FMO06364.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Marcal1-RA | 2411 | CG3753-RA | 74..1154 | 8..1081 | 4990 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4955582..4956349 | 8..775 | 3825 | 99.9 | Plus |
| 2L | 23513712 | 2L | 4956407..4956695 | 775..1059 | 920 | 94.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:31:28 has no hits.
FMO06364.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:55 Download gff for
FMO06364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Marcal1-RA | 64..1154 | 1..1081 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:01:04 Download gff for
FMO06364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Marcal1-RA | 54..1144 | 1..1081 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:10:56 Download gff for
FMO06364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Marcal1-RA | 64..1154 | 1..1081 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:10:56 Download gff for
FMO06364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4955572..4956349 | 1..775 | 99 | -> | Plus |
| 2L | 4956408..4956720 | 776..1081 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:55 Download gff for
FMO06364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4955572..4956349 | 1..775 | 99 | -> | Plus |
| arm_2L | 4956408..4956720 | 776..1081 | 93 | | Plus |
