FMO06373.5prime Sequence
789 bp (789 high quality bases) assembled on 2008-09-15
> FMO06373.5prime
CAGTCGACATGGAAAGTGCGGGGAAACAAGATAATAACGCCACGCAACAG
TTGCCGCAGCGACAGCAGCGGGGAAACCAGCAGGCCAACAAAAATCTCGG
CAAGCATAATGCACAAAAACAAAATGATTCCGCGGACGGAGGCCCGGCTG
AAAAGAAGCAACGATTCGGTGGTCCAAATGCCCAGAATCAAAACCAGAAC
CAGAATCAAAATGGTGGTGTAACGGGCGGTGGTGGTGCAGTTGGTGGCCC
CAATCAAAATAAGAATTTTGGAAACAACAAGGGTGGGTTCGTTGGAAACC
GCAATCGCAACAATAATCGCGCTGGAAACCAAAACCGGACTTTTCCAGGC
AACAACAATCCAAATCAAAAGCCCAATAACGAAACATCAAAGGCGGACGG
CCCTAATGCACTTGCTAAGAACAATGAACCGGCAACTGCAGCTGCTGGCC
AAAATCAAGCGAATCAGAACGCCAACAAGGGCCAAAATCAACGGCAAGGA
CAAAACCAAAATCAAAATCAAGTCCATGGTCAAGGAAATCAAGGAGGACC
AGGAAATCAAGGGGGAGCAGGCAATCAAGGAGGCCAAGGAAATCAAGGAG
GAGCCGGAAATCAGGGAAATGGTCAAGGATTCAGAGGTCGCAAATGCTGG
TAACAAATCAAGGTGGCGGTTTTCTCCGGAGGTCCGCAGAACCAGCAGCG
TGACAACCGAAACCGGAGTGGTCCACGCCCTGGCGGAGGTGCTGGGTGGC
GCGATGAACAGCACCAATATGGGGTGGTGGTGGTGGTGG
FMO06373.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nonA-RD | 6746 | CG4211-RD | 130..905 | 9..789 | 3780 | 99.4 | Plus |
| nonA-RC | 5008 | CG4211-RC | 130..905 | 9..789 | 3780 | 99.4 | Plus |
| nonA-RA | 3747 | CG4211-RA | 130..905 | 9..789 | 3780 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16363358..16363776 | 366..789 | 1870 | 98.8 | Plus |
| X | 23542271 | X | 16361698..16362054 | 9..365 | 1785 | 100 | Plus |
| 2R | 25286936 | 2R | 4730830..4731241 | 773..366 | 1320 | 91 | Minus |
| 3L | 28110227 | 3L | 24534656..24535018 | 408..773 | 1255 | 93.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:31:36 has no hits.
FMO06373.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:58 Download gff for
FMO06373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nonA-RA | 130..905 | 9..789 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:01:16 Download gff for
FMO06373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nonA-RC | 166..941 | 9..789 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:00 Download gff for
FMO06373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nonA-RA | 130..905 | 9..789 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:00 Download gff for
FMO06373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16361698..16362054 | 9..365 | 100 | -> | Plus |
| X | 16363358..16363776 | 366..789 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:58 Download gff for
FMO06373.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16255731..16256087 | 9..365 | 100 | -> | Plus |
| arm_X | 16257391..16257809 | 366..789 | 98 | | Plus |
