FMO06379.5prime Sequence
1141 bp (968 high quality bases) assembled on 2008-09-15
> FMO06379.5prime
CAGTCGACATGTCGGCGACGCACCTGGTGATTCTGGCCGTCGCTCTGCTG
GTGGACATCGCATCCGCGGGCGTTCCCCTTCCGCGATACGAGGCGCTCCT
CAAGCAGCAGTCCCCTCCATCGGATCCCACACTGGGTCTCTACGACGACG
GGGATAAGGTTATCCGCCTGTCGGTCGACAACTTCAATGCTACCGTCCTG
GACCAGAATCGCGGAGCATTAGTCGAGTTCTACAACACTTACTGCGGCCA
CTGTCGCAGATTCGCACCCACGTACAAGTCGGTAGCGGAGCACCTGTTGC
CCTGGTCCGAGGTGCTCATCGTGGCGGCCATCGATTGCGCCGCCGAGGAG
AACAATGGCATCTGCCGCAACTACGAGGTGATGGGCTATCCAACGCTACG
TTATCTGGGCCCCGGTTTCCAGCCGGGTCCTCAGCATTACGGGCAGAGCC
TGCATACGCAGGATAAAAACGAAATCCGCGAAATACTAGCGGGTATGGTG
GCCGCAGAGAACCTGACCAGCAGCCACAACAATTCCTACTGGCCAAACTT
TCACTACTTAACGGAGAACGATTCAGCCAGCAGTTTGTTCGAAGGTCTCA
GCAGCGCCACGGAGTACGTGGCAGTGGTTCACGAACCGGAGAACACCACT
CTAGGCGTCGAGGTGGCTCTGTTCATGACCCAGTGGCCAGCGGTGAGGGT
CCGGCGCGTCATCGATCCAGCCGTGGCCGCCAAATTCAAGATTGATCCGA
CCAATCTGCCCCTCAGCTGGTGGATCGCAAAGGTGAAATTACGGCGTACG
CGCCGGAATCTACCAATGGTGAATCGTATGCCAAGAAGCTGTGGGATGTA
CTGGTTAAGAAGAATTATCCCTCCCAGGCCAGTGAGGTGCACCAATCATC
CGCCACGCTGGCGTCCATGATTAAGGGACAAAACGAATTGATCGATGAGT
GCACCGGGACAGCACTTTCGTCTACAAGCGAACCTCGAAGCAGGCCATAC
GACCGGTGCTGCCAACGAGTGTCCACGTGGGCGAAATCAGTGACGAGAAA
CTGTTCGCCCTGCACGATTCCTACGTGTGCTGCACGCTACCATCCGCCTG
CGCGCCCATGGCCACGACTGTGGGTCCAACGGAGAGGCACT
FMO06379.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:51:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4670-RB | 2620 | CG4670-RB | 400..1512 | 9..1115 | 4875 | 96.6 | Plus |
| CG4670-RA | 2370 | CG4670-RA | 150..1262 | 9..1115 | 4875 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13233802..13234897 | 1097..9 | 4550 | 96.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:51:56 has no hits.
FMO06379.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:15 Download gff for
FMO06379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4670-RA | 143..1252 | 1..1103 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:01:26 Download gff for
FMO06379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4670-RA | 139..1248 | 1..1103 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:42:46 Download gff for
FMO06379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4670-RA | 143..1252 | 1..1103 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:42:46 Download gff for
FMO06379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13233795..13234903 | 1..1103 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:15 Download gff for
FMO06379.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9121300..9122408 | 1..1103 | 96 | | Minus |
