FMO06388.5prime Sequence
883 bp (851 high quality bases) assembled on 2008-09-15
> FMO06388.5prime
CAGTCGACATGGCGCCCACAAAAGCAACAACGCGCGCGGCCATCACAAGC
GGGCATCATCAGCTGCAGCAGGCAGTGAATCCCATCCTGGGAGCCCTGGG
AGCTGCCACTAGGAAGGGACTGACTCGGAGGGCGGCTGCCACGGGAAACA
TCGATCCGAATGTGGAGAATATGCAGACGCGCGCCAAACGCAAGGCCGAC
CACAGTCCAATTAAAAATGACAAAATCAAGCGCTCGGCGCTGGGTAACCT
GACCAACAATGTTAAGATCATGACACTGCATCCGGCACAGGATGAGGAGC
AGTCGGGCGTGGGCAAAAAGCCAACGGCCCAGCAGCTGCAGGCCCTGATG
GATGCTAAGAAACAGGAGAATCTCAGCGTAAATGTCTTTGGCGCCAGTAA
GATGACTACGCGCGCCTCCAGTAAAGTGGAGGATTCGGTGGAGAACTGCC
ACAAAGTGCTCGATAAGCTGGAAGAGGCGTTGGCCAGGCCCAAACCGCGC
CCCAAGGCAGTGCCTGCCGCAAAAAAGACCGTTTTGGGGGAGGTTCAGCT
ACCGGCCATGCCAAATCCTATGCAGATTCCCGTTTTACTGCCGCCCACGC
ACAATCTGGCTGCTCCCCAGGTTGCCGCCGTCAAGCCAGTTCGTCGGATC
TCCAATGACTTCAACAAGACTGAGGACAGCCCTGTACATGTTCGCGCTGG
GAGGATGTCTCCAGTTGCGACTCCATGCGGCTGTCTGGAAACTTTGAGGC
GGCGCGACGTCGCTCCGCCAAGTTGCAGCAAAAGACTGAGCAGCATCCAC
AGCCGCTGTTGCTGACATCCCAGAGACTGCTCCAGCCAGGTGGTCCCATT
CCGCCAGTGCCCGAAGAAGTAGAGGACTCCAAC
FMO06388.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CycB3-RB | 2883 | CG5814-RB | 289..1159 | 9..878 | 4195 | 99.1 | Plus |
| CycB3-RA | 2461 | CG5814-RA | 289..1159 | 9..878 | 4195 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24869658..24870528 | 878..9 | 4070 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:20:21 has no hits.
FMO06388.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:37 Download gff for
FMO06388.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycB3-RA | 281..1164 | 1..883 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:01:36 Download gff for
FMO06388.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycB3-RA | 360..1243 | 1..883 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:38 Download gff for
FMO06388.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CycB3-RA | 281..1164 | 1..883 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:38 Download gff for
FMO06388.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24869653..24870536 | 1..883 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:37 Download gff for
FMO06388.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20695375..20696258 | 1..883 | 98 | | Minus |
