FMO06390.5prime Sequence
645 bp (645 high quality bases) assembled on 2008-09-15
> FMO06390.5prime
CTTATCAGTCGACATGGGTGGACAAAAAGCACCCATCCTCGCTGCCGTGG
CGCTGGTGATCGCCTGTGCCGCTCCAGCAATAGCCGATGTGAATGTCACC
GCCTTGTGCCTGCTGGTCAGCAATGGGAACTACGTGGCCAGCCAGTCGGA
CTGCTCGACCTACTACCAGTGCCAGGGATCCTCGTTCACGGCCATGTCCT
GTCCCCAGGGCTACTACTTCGACAAGAATGCCCAGCAGTGCACGGGCACT
GTGCCGAGCACCTGCACCAGCAACTCCGATCCCTGTCTGGGCAAGGCGGT
GGGATCCTTCGCGGCATCCAGTTCGTCCTGCGGCGGCTACTACTACTGCG
GAGCCTCCGGCGCTGTGAGGGGCAATTGTCCTGCCGGCGAGAACTTCAAT
CCCACCACAATGGCCTGTGTGTACAAGAACAACTATCCATGCAGCGAGTC
CGCCGGTGATGGCTCCACTGTGTCGGTCGCCCTCAACCTATGCAATCTTG
TCAAGAATGGCTTTTACTTTGGAAGCCCTTCCGACTGCAGTGGCTGGAAC
TTCTGCCAGGACAACGTTCTGCACTCGGGATCCTGCGAAGATGGTCTAGT
ATTCAATGTGCAGCCAAAACTGCGGCTACAAGATGGCCTCATCCT
FMO06390.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7290-RB | 1667 | CG7290-RB | 46..679 | 14..645 | 3090 | 99.4 | Plus |
CG7290-RA | 1358 | CG7290-RA | 46..679 | 14..645 | 3090 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20205297..20205927 | 645..17 | 3045 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:42:57 has no hits.
FMO06390.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:00 Download gff for
FMO06390.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7290-RA | 46..679 | 14..645 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:01:39 Download gff for
FMO06390.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7290-RA | 43..676 | 14..645 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:45 Download gff for
FMO06390.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7290-RA | 46..679 | 14..645 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:45 Download gff for
FMO06390.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20205297..20205931 | 9..645 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:00 Download gff for
FMO06390.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20198397..20199031 | 9..645 | 98 | | Minus |