Clone FMO06390 Report

Search the DGRC for FMO06390

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:63
Well:90
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG7290-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO06390.5prime Sequence

645 bp (645 high quality bases) assembled on 2008-09-15

> FMO06390.5prime
CTTATCAGTCGACATGGGTGGACAAAAAGCACCCATCCTCGCTGCCGTGG
CGCTGGTGATCGCCTGTGCCGCTCCAGCAATAGCCGATGTGAATGTCACC
GCCTTGTGCCTGCTGGTCAGCAATGGGAACTACGTGGCCAGCCAGTCGGA
CTGCTCGACCTACTACCAGTGCCAGGGATCCTCGTTCACGGCCATGTCCT
GTCCCCAGGGCTACTACTTCGACAAGAATGCCCAGCAGTGCACGGGCACT
GTGCCGAGCACCTGCACCAGCAACTCCGATCCCTGTCTGGGCAAGGCGGT
GGGATCCTTCGCGGCATCCAGTTCGTCCTGCGGCGGCTACTACTACTGCG
GAGCCTCCGGCGCTGTGAGGGGCAATTGTCCTGCCGGCGAGAACTTCAAT
CCCACCACAATGGCCTGTGTGTACAAGAACAACTATCCATGCAGCGAGTC
CGCCGGTGATGGCTCCACTGTGTCGGTCGCCCTCAACCTATGCAATCTTG
TCAAGAATGGCTTTTACTTTGGAAGCCCTTCCGACTGCAGTGGCTGGAAC
TTCTGCCAGGACAACGTTCTGCACTCGGGATCCTGCGAAGATGGTCTAGT
ATTCAATGTGCAGCCAAAACTGCGGCTACAAGATGGCCTCATCCT

FMO06390.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG7290-RB 1667 CG7290-RB 46..679 14..645 3090 99.4 Plus
CG7290-RA 1358 CG7290-RA 46..679 14..645 3090 99.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20205297..20205927 645..17 3045 99.2 Minus
Blast to na_te.dros performed on 2014-11-28 22:42:57 has no hits.

FMO06390.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:50:00 Download gff for FMO06390.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7290-RA 46..679 14..645 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 11:01:39 Download gff for FMO06390.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7290-RA 43..676 14..645 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:45 Download gff for FMO06390.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7290-RA 46..679 14..645 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:45 Download gff for FMO06390.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 20205297..20205931 9..645 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:50:00 Download gff for FMO06390.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20198397..20199031 9..645 98   Minus