FMO06412.5prime Sequence
965 bp (862 high quality bases) assembled on 2008-09-15
> FMO06412.5prime
CAGTCGACATGGAGAATGAAACCGAAGCTCTTGATCCGGAAGTTTATGCC
GATGAGACCTCTACAGATGATAGCTCTGGTGATGATGAGGTAATCCTCAA
TCCAGTTGAAGGTCTGCAGCCGGCGGTTGAGATTGATGAACAACGTGACC
AGCCTGGTGAGAACGCGGAACCCGAGCAACCGAGAGTTCCGCCTTTAATT
CTGGTAGATCCTCCGCATTTGCCCAGTCCCCCGAGAAATTCCCGCCGCAA
TCAAGGCGAAGAGCAGGAGGTGATCTCATTAGAAACGCCATCACCGCCCA
AGAAACGTAAACGTCTCTCCGCTGCTGCCGATAAAAGCCTTAAAAAGTCG
CCCGAGGGCAAACCAATAGTTGTAGATGACGAGGACGATGGCATGACCTG
TCCCATTTGTCTGGATTCCTGGGAGATGAGTGGCGAGCATCGACTGGTCT
CGCTGCGATGTGGTCACCTCTTTGGGGAAAGCTGCATTCGGCGGTGGTTA
AACGAAAGCCATCGCCAATCTTCTGTGAAGGTGTGCCCGCAGTGCAAGAC
GAAGGCCACATTTAGAGATATCCGTCATCTGTATGCGAAGCGCATTCAGA
TGCTGGACACGGATATTAGGGAGCAGCTGGAGGCGGAGCGGCGGCGTACA
CATACTCTAACAACAGAGCTGGCTACCGCGAAGCTGGCTAACACACTCAC
CACTGAGAAGCTGATTCTCCTGCAGAAGGACTACGAACGGCTTAAGGAGC
TGGTGAGGGCACGTGGTGGTCGGGGAGCCTTCTGAGGCGATGCATCCCGC
CAGAAGAGCATTTAACAACTAGCCACCTACCGATTGTACATGGAGAAGAA
CTTCGAGATACTCGAGACCCGGCTGGCCGGTATTGTTCTATTCCGCCAAG
CACTCCATGCTTGGTGGCCTCGCAAAAGAATGGCAAAATCTGTTTCCTCC
GGCATCGGGGTACGC
FMO06412.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13025-RB | 2227 | CG13025-RB | 256..1212 | 9..965 | 4440 | 98 | Plus |
| CG13025-RA | 3145 | CG13025-RA | 256..1212 | 9..965 | 4440 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16778560..16779481 | 929..9 | 4345 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:50:07 has no hits.
FMO06412.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:21 Download gff for
FMO06412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13025-RA | 250..1195 | 1..947 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 13:57:12 Download gff for
FMO06412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13025-RA | 229..1174 | 1..947 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:40 Download gff for
FMO06412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13025-RA | 250..1195 | 1..947 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:40 Download gff for
FMO06412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16778541..16779485 | 1..947 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:21 Download gff for
FMO06412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16771641..16772585 | 1..947 | 98 | | Minus |
