FMO06414.5prime Sequence
594 bp (592 high quality bases) assembled on 2008-09-15
> FMO06414.5prime
CAGTCGACATGGAGGAACTACGCAAGCATTTATCCAAGGTGAACGTGCCA
TGCGCATCCGGGGCGGGCAGTCCTCCCATCTACAAGGACGAGTGCGTCTA
CTCCTATGACAATCCCGAGACGCCCACCGGTTTGTACGTGTGCCTGCACA
GCTTTTTGGGCTTCGGCGAGGCGTATGTGCGGGAGTATGCCGACAAGACC
GGCAACCGGGTCTTCCTCCACATCCAGCGGGTGAAGACGATCAAGGAGGG
CGCCGACATGGAGGCCGAATGCGCGGAGTCGGAGGCAGGACCGGAACGGA
AGATCACCCGCCTGGCCATTGGCGTCGAGGGCGGCTACAACGAGTCGGAC
ATGGCCAAGAAGTACGAGATCAAGGACACGTACAGCATCGTGGTGGCTCC
GCACCTGGATAAGAAGCTGCCCTATCCGGATCCAGAGCTGCCCATGCGTG
TCACCCAGTCGGTGGAAGCGATCCTGGCCGCCGACTCGGCAATTGCCAAG
TTGGAGAAGGCCACGCTGATGGGCACCTGGGATGGTGAAGTGCGTCAGGC
GTCGAAGTACGCAGATAACCTGCAGCAACTGGATAATGGCAAGA
FMO06414.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:32:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12082-RB | 2706 | CG12082-RB | 127..712 | 9..594 | 2915 | 99.8 | Plus |
| CG12082-RA | 2779 | CG12082-RA | 200..785 | 9..594 | 2915 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:32:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3147531..3148045 | 523..9 | 2575 | 100 | Minus |
| 3L | 28110227 | 3L | 3147399..3147471 | 594..522 | 350 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:32:49 has no hits.
FMO06414.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:51:18 Download gff for
FMO06414.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12082-RA | 196..784 | 5..593 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 13:55:15 Download gff for
FMO06414.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12082-RA | 196..784 | 5..593 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:31 Download gff for
FMO06414.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12082-RA | 196..784 | 5..593 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:31 Download gff for
FMO06414.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3147400..3147470 | 523..593 | 98 | <- | Minus |
| 3L | 3147532..3148049 | 5..522 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:51:18 Download gff for
FMO06414.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3147400..3147470 | 523..593 | 98 | <- | Minus |
| arm_3L | 3147532..3148049 | 5..522 | 99 | | Minus |
