FMO06415.5prime Sequence
1126 bp (1044 high quality bases) assembled on 2008-09-15
> FMO06415.5prime
CAGTCGACATGGACGCTGAAAGTGATAGCGATGTGGAGATCATAGAGACG
GAACTCATGAACCATCATCACCACCATCGCCAGACGGAACCAAAGAGGCA
TCCCGCAAAGATGTACCCGCAAATTCCATCCGCCATACCCTCCCCACCAT
TTTCACCCACTGATCCTACGGATATGCCGCTGGTCAAGGAGATTCTGGCT
CGCAGTGAACATATAAATGTTCCCGAAGGAACCGTGCTCTGTGTTCCGTG
CTACCTGTGCAAACAGCCCTTCAATGATATTGAATCCTTCAAGGAGCACC
TCACCCAACATGCGGCGGAAATTAACGCCTGGAATAACACGCGTGCGCAG
GAGCAGACACCTCCGCCGACGATAACACCCTTTGTTCAGTCCATGAATAA
ACCATTCGTGCATCCCACAGATCAGCACTTATTTCATTCCATTGATCATG
GTGACATGGATCACCATCACAATGCCCACTACCGCAATCGGATGGAGTTT
GGCTGTCCGCCACCCATGGATTTTTACTCACCGCCGCTCGAACCAGAAAT
TCCATTTCAAATGCCTGCGGTTCATCAACATCCGATTCAGATACCACCCA
TGTATATGACCGCTCAGCATACGGCTTATGAGCCACCAGTGCAGTTTTTA
GGTCATCGGCCACTCGAACTGCGCCAAAAACTTCCAATGTCACCGCAATC
TCCTCTGGAGCCTTCTGGTCATCCAATGGCAAGCGCGATTCCAAGTAACC
AACATACTTCGCTTGAAATGCAAACCTTTGTGTGCCGGAAGGATTCTCAC
AAGGGTGGAGGAACCACCGGTCTTGGAAAATCCCCGACCCCAAGCACAAG
ATCCGATTCAGGATGCGGGTGCAGGGAAGTCCCGATCGGCGGTTCTGATC
GAACCCAAGCCCCCAAATGCCAAATCCTTGGCTTTCAATCAGGTCAGTTC
GAGTGCAATTGGTGCGGAAAGCGATTGAGCTCCCGCCAGTCGCTGAAATA
CCCACGAGAGCCACTTCCACGGAATAAAGAGCTGGCTGTGAATCGTTAGA
GAAGATTGGACCAGCCGCATAGTGCCCTCACTGCCAAGAAACGCTACAAG
CGGCGGACCTTCTCTCCTGAATGCCA
FMO06415.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18446-RA | 2115 | CG18446-RA | 280..1397 | 8..1120 | 5255 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9871749..9872859 | 8..1112 | 5030 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:37:50 has no hits.
FMO06415.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:48:12 Download gff for
FMO06415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18446-RA | 274..1400 | 1..1125 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 13:55:17 Download gff for
FMO06415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18446-RA | 272..1398 | 1..1125 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:13:53 Download gff for
FMO06415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18446-RA | 274..1400 | 1..1125 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:13:53 Download gff for
FMO06415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9871743..9872869 | 1..1125 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:48:12 Download gff for
FMO06415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5759248..5760374 | 1..1125 | 98 | | Plus |
