FMO06426.5prime Sequence
762 bp (762 high quality bases) assembled on 2008-09-15
> FMO06426.5prime
CAGTCGACATGTCGCCTAAATATCATAATTTCGAGATTGCACTGGTCTAC
TTTCTGCTGCTAATACCATGGCCACCCACGAATGTGATCAGAATCCTCTG
CTCGCGAGATAACAGCCGACTGGTGCGCAAAATAGTGCGCTCCAAATGGA
CTCCCATTCTGGACAAGCATCAGGTGAAGCTGCCGCTGGAGTGCCCGCTC
CATCCGTTCCGGGATGTCTTTGCCCCCCGCCAGGATGCCAAGCAGAGGGA
TCGACCTACTCAGTGGACGTGCAGGAAATGTGGCAAGAGCTTCTACCAGG
AGAAGCATCTGGACTTACATTTCGACACACGCCACAAGAGCATCATCAAT
GAGGCGGAGGATGCCGTTTGCCTGGCCGACTTCTGCGACATTATGCGGTG
TGAGGTATTTGAAACGGAGGACGCATCTAGCCTGAAGTTTGGTGACCAGC
ACATTGTCACGGACATCGAGGTCTGGGGCGACTCCCTGGGCCAGAACTCC
GCGTTGGCCAAAGCGAATGCTGCCTACTTGAGCTTAATACCTAGAACTTC
CACATTGGGTGCCTCGCGTGCCGCCAAAGTACAAAATCGTCAATTACTTC
AAGACAAGCCAAGCCAGGCCAGCAAGCAGAATCAGTCACCGGCAGGTGAG
CGAACACATCCCCAATCCCACCACCATCCCCGAGATCGTGCATCCACCAC
AGCCAATCCCCTTCGCCTAGATCCATCGCCGGAGGACGGGTCGGCGGCTA
GGCCCAAGTCGG
FMO06426.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:05:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG4133-RC | 2642 | CG4133-RC | 271..1024 | 9..762 | 3755 | 99.9 | Plus |
CG4133-RA | 2629 | CG4133-RA | 271..1024 | 9..762 | 3755 | 99.9 | Plus |
CG4133-RB | 2554 | CG4133-RB | 271..907 | 9..645 | 3185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:05:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 456793..457014 | 541..762 | 1095 | 99.5 | Plus |
2L | 23513712 | 2L | 456537..456729 | 352..544 | 965 | 100 | Plus |
2L | 23513712 | 2L | 456287..456469 | 172..354 | 915 | 100 | Plus |
2L | 23513712 | 2L | 456084..456225 | 34..175 | 710 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:05:25 has no hits.
FMO06426.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:27 Download gff for
FMO06426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4133-RA | 263..1024 | 1..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 13:55:31 Download gff for
FMO06426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4133-RA | 251..1012 | 1..762 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:50 Download gff for
FMO06426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4133-RA | 263..1024 | 1..762 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:50 Download gff for
FMO06426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 456289..456468 | 174..353 | 100 | -> | Plus |
2L | 456539..456729 | 354..544 | 100 | -> | Plus |
2L | 456797..457014 | 545..762 | 99 | | Plus |
2L | 456086..456223 | 36..173 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:27 Download gff for
FMO06426.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 456289..456468 | 174..353 | 100 | -> | Plus |
arm_2L | 456086..456223 | 36..173 | 100 | -> | Plus |
arm_2L | 456539..456729 | 354..544 | 100 | -> | Plus |
arm_2L | 456797..457014 | 545..762 | 99 | | Plus |