FMO06432.5prime Sequence
874 bp (874 high quality bases) assembled on 2008-09-15
> FMO06432.5prime
CAGTCGACATGAAGCTGTTCCTACTTACACTCTCCGTGGCCCTAGCCGTG
GTCGCCGCCTCCCCAGGCTTCAACCGCACCAGCCTTCTGCCCCAGGTGAC
CATTTCCGAGGGTGCCGAGGGCCGCATCGTCAACGGTTACCCAGCGCCCG
AGGGAAAGGCTCCCTACATTGTGGGACTGTTGATCCGCACCGATGGAAGC
AACAGTGCCGCGGTTGGAGCTGGAACCATCATCGCCAGCGACTGGATTCT
GACCGCCGCTCACTGTCTGACCACCGACTACGTGGAGATCCACTATGGAT
CCAACTGGGGCTGGAACGGAGCTTTCAGGCAATCTGTCCGCCGTGACAAC
TTTATCAGCCATCCAAACTGGCCCGCTGAGGGCGGTCGTGACATCGGTCT
GATCCGCACTCCCTCCGTGGGCTTCACCGACTTGATCAACAAGGTCGCCC
TGCCAAGCTTCAGCGAGGAGAGCGACCGCTTCGTGGACACATGGTGCGTT
GCCTGCGGATGGGGCGGCATGGACAATGGCAACCTGGCCGACTGGCTGCA
GTGCATGGACGTCCAGATCATCAGCAACAGCGAGTGCGAGCAGTCCTACG
GCACCGTGGCCAGCACTGACATGTGCACGCGCCGCACCGATGGCAAATCC
TCTTGCGGAGGCGACTCTGGTGGTCCACTCGTTACCCATGACAACGCTCG
GCTAGTGGGAGTGATTACCTTTGGCTCGGGTGGACTGCCACAGCGGTCCT
TCCGGCTACACCCGCGTCACCGACTACTTGGGATGGATCCCGTGACAACA
CCGGCATCTCCTACGCAAGCTTTCTAGACCATTCGTTGGCGCGCGGGCCA
GGTAAGTGGTCATAATCATATCAT
FMO06432.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18179-RA | 870 | CG18179-RA | 18..822 | 8..814 | 3985 | 99.8 | Plus |
| CG18180-RA | 901 | CG18180-RA | 104..811 | 105..814 | 1640 | 82.4 | Plus |
| CG8329-RA | 910 | CG8329-RA | 367..671 | 390..694 | 415 | 76.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9639288..9640092 | 8..814 | 3935 | 99.8 | Plus |
| 3L | 28110227 | 3L | 9641116..9641823 | 105..814 | 1590 | 82.3 | Plus |
| 3L | 28110227 | 3L | 9638478..9638782 | 390..694 | 415 | 75.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:49:45 has no hits.
FMO06432.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:09 Download gff for
FMO06432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18179-RA | 12..832 | 1..826 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 13:55:38 Download gff for
FMO06432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18179-RA | 10..830 | 1..826 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:32 Download gff for
FMO06432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18179-RA | 12..832 | 1..826 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:32 Download gff for
FMO06432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9639282..9640102 | 1..826 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:09 Download gff for
FMO06432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9632382..9633202 | 1..826 | 98 | | Plus |
