FMO06440.5prime Sequence
530 bp (530 high quality bases) assembled on 2008-09-15
> FMO06440.5prime
CAGTCGACATGAAGAGACTTAAAGCGTACCTAAAGGATGGCATCAATGTG
GCGGCGGTAATGTGTCTGGGCGATACTATATCCCAGTTCTTTTTTGATAA
GAAATCGTTGGACGAATGGGATGCGGGGCGAACCCTCCGTTTCGGCATCG
TTGGACTGGTGTTCGTTGGCCCAACTTTGCGCCGGTGGTACCATTTTTTG
GAGTCCCGGGTTCCCAAAACCTACTCGCCAATGCGGCGGGGCGTTACCAA
AATGCTGGTCGACCAGACCCTTTTTGCGCCACCCTTTACCATGGCCATGT
CTTTTTTGGTGCCACTCTCCAACGGAGAGCCCATCGACCGAATCCGGCAG
CGCATTCTTGATAGCTACCTATCTATATTGGTCCGCAACTATATGCTCTG
GCCGGCCGCACAGATGCTAAACTTCAGATTCGTGCCGCTGGGCTACCAGG
TGCTCTACGCCCAGTTCATCGCCCTCGTATGGAACTGCTACCTCTCCATG
ATACTTAATAGCGCAAGCTTTCTAGACCAT
FMO06440.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11077-RA | 687 | CG11077-RA | 113..616 | 9..512 | 2520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 1028746..1029249 | 512..9 | 2520 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:20:45 has no hits.
FMO06440.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:54 Download gff for
FMO06440.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11077-RA | 110..616 | 2..512 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 13:55:51 Download gff for
FMO06440.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11077-RA | 108..614 | 2..512 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:55 Download gff for
FMO06440.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11077-RA | 110..616 | 2..512 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:55 Download gff for
FMO06440.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 1028746..1029252 | 2..512 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:54 Download gff for
FMO06440.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 1049372..1049878 | 2..512 | 99 | | Minus |
